Variant report

Variant	rs2083701
Chromosome Location	chr4:78342325-78342326
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 25 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs10008817	1.00[CEU][hapmap];0.86[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs10017843	1.00[CEU][hapmap];0.86[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs1031081	0.95[AFR][1000 genomes];0.99[ASN][1000 genomes]
rs10470904	0.86[CHB][hapmap]
rs11931577	0.82[CHB][hapmap];1.00[JPT][hapmap];0.88[YRI][hapmap];0.95[AFR][1000 genomes];0.99[ASN][1000 genomes]
rs11934190	0.85[AFR][1000 genomes];0.99[ASN][1000 genomes]
rs11934887	0.82[CHB][hapmap];1.00[JPT][hapmap];0.88[YRI][hapmap];0.95[AFR][1000 genomes];0.99[ASN][1000 genomes]
rs11936072	1.00[CEU][hapmap];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs11936117	1.00[CEU][hapmap];0.82[CHB][hapmap];0.92[JPT][hapmap];0.89[YRI][hapmap];0.93[AFR][1000 genomes];0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11942781	1.00[CEU][hapmap];0.82[CHB][hapmap];0.92[JPT][hapmap];0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11946102	1.00[CEU][hapmap];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs17002675	1.00[CEU][hapmap];0.82[CHB][hapmap];0.92[JPT][hapmap];0.89[YRI][hapmap];1.00[AFR][1000 genomes];0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs17002676	1.00[CEU][hapmap];0.92[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs17002700	0.80[CEU][hapmap]
rs2119977	0.86[AMR][1000 genomes];0.95[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs35848195	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs4859839	1.00[CEU][hapmap];0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs4859840	1.00[CEU][hapmap];0.91[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs60688594	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs62302403	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs62302404	0.92[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs62302406	0.91[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs6826277	0.80[CEU][hapmap]
rs72650428	0.95[AMR][1000 genomes];0.96[EUR][1000 genomes];0.85[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv829974	chr4:78240718-78415642	Weak transcription Enhancers Flanking Active TSS ZNF genes & repeats Bivalent Enhancer Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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dbSNP/dbVar ID: rs12345 /nsv7879
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