Variant report

rSNPs within LD-proxies of this variant (count:34)

rs_ID	r²[population]
rs1154807	0.93[ASN][1000 genomes]
rs1397246	0.93[ASN][1000 genomes]
rs1510344	0.93[ASN][1000 genomes]
rs16834133	0.96[ASN][1000 genomes]
rs16847297	1.00[ASN][1000 genomes]
rs1858240	1.00[ASN][1000 genomes]
rs1983208	0.93[ASN][1000 genomes]
rs41497744	0.82[ASN][1000 genomes]
rs4333097	1.00[ASN][1000 genomes]
rs4856664	0.89[ASN][1000 genomes]
rs4856667	0.95[AFR][1000 genomes];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs4856745	0.82[ASN][1000 genomes]
rs4856747	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs56340997	0.82[ASN][1000 genomes]
rs57628918	0.93[ASN][1000 genomes]
rs58618482	0.93[ASN][1000 genomes]
rs59539229	0.89[ASN][1000 genomes]
rs59872885	0.96[ASN][1000 genomes]
rs60022403	1.00[ASN][1000 genomes]
rs60886133	1.00[ASN][1000 genomes]
rs6779506	1.00[ASN][1000 genomes]
rs73014613	1.00[ASN][1000 genomes]
rs73014673	1.00[ASN][1000 genomes]
rs73018723	0.82[ASN][1000 genomes]
rs73018726	0.82[ASN][1000 genomes]
rs73030496	0.93[ASN][1000 genomes]
rs73032205	0.96[ASN][1000 genomes]
rs7620145	0.93[ASN][1000 genomes]
rs7625559	1.00[ASN][1000 genomes]
rs7628078	1.00[ASN][1000 genomes]
rs7647638	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs962873	0.93[ASN][1000 genomes]
rs9826218	0.93[ASN][1000 genomes]
rs9884026	0.93[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv533237	chr3:161019834-161804660	Enhancers Flanking Bivalent TSS/Enh Flanking Active TSS Weak transcription Bivalent/Poised TSS Bivalent Enhancer Active TSS ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	91 gene(s)	inside rSNPs	diseases
2	nsv460918	chr3:161754109-161791399	Enhancers Weak transcription Active TSS ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases
3	nsv592143	chr3:161754109-161791399	Enhancers Weak transcription Active TSS ZNF genes & repeats	n/a	n/a	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:161759200-161765000	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived

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