Variant report
Variant | rs2113623 |
---|---|
Chromosome Location | chr2:21789307-21789308 |
allele | C/G |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
(count:1 , 50 per page) page:
1
No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr2:21789116..21791651-chr2:21801369..21803273,2 | K562 | blood: |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs1016415 | 0.81[AFR][1000 genomes];1.00[EUR][1000 genomes] |
rs10170974 | 0.89[EUR][1000 genomes] |
rs10172456 | 1.00[EUR][1000 genomes] |
rs10200700 | 1.00[AMR][1000 genomes] |
rs10865471 | 0.96[AMR][1000 genomes] |
rs11126670 | 0.82[ASN][1000 genomes] |
rs1159628 | 1.00[AMR][1000 genomes] |
rs1160573 | 0.92[AFR][1000 genomes];0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];0.81[ASN][1000 genomes] |
rs13431557 | 1.00[AMR][1000 genomes] |
rs1477473 | 1.00[AMR][1000 genomes] |
rs2194560 | 0.89[EUR][1000 genomes] |
rs2194561 | 0.90[AFR][1000 genomes];0.84[AMR][1000 genomes];1.00[EUR][1000 genomes];0.86[ASN][1000 genomes] |
rs35299375 | 0.94[ASN][1000 genomes] |
rs4302240 | 1.00[AMR][1000 genomes];0.89[EUR][1000 genomes] |
rs4665344 | 0.80[AMR][1000 genomes];1.00[EUR][1000 genomes];0.82[ASN][1000 genomes] |
rs4665370 | 1.00[AMR][1000 genomes] |
rs4665932 | 0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes] |
rs4665942 | 0.96[AMR][1000 genomes] |
rs58722375 | 1.00[EUR][1000 genomes] |
rs6723855 | 0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];0.89[EUR][1000 genomes] |
rs6739328 | 1.00[AMR][1000 genomes] |
rs6744013 | 0.83[AFR][1000 genomes];1.00[AMR][1000 genomes];0.89[EUR][1000 genomes] |
rs7581794 | 0.80[AMR][1000 genomes];1.00[EUR][1000 genomes];0.82[ASN][1000 genomes] |
rs956046 | 0.87[AFR][1000 genomes];0.85[ASN][1000 genomes] |
rs970127 | 1.00[AMR][1000 genomes] |
rs9710941 | 0.90[EUR][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | nsv1011486 | chr2:21475803-22364002 | Enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Strong transcription | TF binding regionCpG islandChromatin interactive regionlncRNA | 11 gene(s) | inside rSNPs | diseases |
2 | nsv535602 | chr2:21475803-22364002 | Enhancers Weak transcription ZNF genes & repeats Active TSS Bivalent Enhancer Flanking Active TSS Strong transcription Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNA | 11 gene(s) | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr2:21781200-21790000 | Weak transcription | Ovary | ovary |