Variant report

Variant	rs2136537
Chromosome Location	chr11:108993682-108993683
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:108989018..108990754-chr11:108993164..108995394,2	K562	blood:

Extended variants
information (count: 33 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:31)

rs_ID	r²[population]
rs12795743	1.00[ASN][1000 genomes]
rs12797437	1.00[ASN][1000 genomes]
rs12800678	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12801760	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12807118	1.00[ASN][1000 genomes]
rs12807207	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12808035	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1396918	1.00[ASN][1000 genomes]
rs1509721	0.82[EUR][1000 genomes]
rs17633182	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17633211	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17633229	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17633258	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17706299	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17706334	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17706358	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17706480	1.00[ASN][1000 genomes]
rs17706512	1.00[ASN][1000 genomes]
rs1876858	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2136538	1.00[ASN][1000 genomes]
rs34356994	1.00[ASN][1000 genomes]
rs34930115	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35335615	1.00[ASN][1000 genomes]
rs35540887	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35974851	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4082792	1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6589056	0.86[AFR][1000 genomes]
rs6589058	0.82[AFR][1000 genomes]
rs71475130	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7938477	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7946810	0.82[AFR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1040650	chr11:108859584-109174553	Enhancers ZNF genes & repeats Flanking Active TSS Weak transcription Active TSS Bivalent Enhancer Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	nsv898390	chr11:108893765-109003536	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:15 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:108990400-108994800	Enhancers	Fetal Heart	heart
2	chr11:108991400-108994600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr11:108991600-108994400	Weak transcription	ES-I3 Cell Line	embryonic stem cell
4	chr11:108992400-108994400	Weak transcription	iPS-20b Cell Line	embryonic stem cell
5	chr11:108992400-108994600	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
6	chr11:108992400-108994600	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
7	chr11:108992400-108994600	Weak transcription	Left Ventricle	heart
8	chr11:108992600-108994600	Weak transcription	H1 Cell Line	embryonic stem cell
9	chr11:108992600-108994600	Weak transcription	HUES6 Cell Line	embryonic stem cell
10	chr11:108992600-108994600	Weak transcription	HUES64 Cell Line	embryonic stem cell
11	chr11:108992600-108994600	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
12	chr11:108992600-109000600	Weak transcription	H9 Cell Line	embryonic stem cell
13	chr11:108992800-108994200	Weak transcription	iPS-15b Cell Line	embryonic stem cell
14	chr11:108992800-108994400	Weak transcription	iPS-18 Cell Line	embryonic stem cell
15	chr11:108993000-108994400	Weak transcription	HUES48 Cell Line	embryonic stem cell

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