Variant report

Variant	rs2145151
Chromosome Location	chr14:69129780-69129781
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr14:69128890..69132387-chr14:69257388..69259950,3	K562	blood:
2	chr14:69113345..69115393-chr14:69129632..69132510,2	K562	blood:
3	chr14:69128588..69133050-chr14:69253079..69257196,5	MCF-7	breast:
4	chr14:69128066..69130361-chr14:69254081..69256689,3	MCF-7	breast:
5	chr14:69122826..69132436-chr14:69256721..69264610,21	MCF-7	breast:
6	chr14:68617419..68619958-chr14:69128377..69130233,2	MCF-7	breast:

Variant related genes	Relation type
ENSG00000185650	Chromatin interaction

Extended variants
information (count: 10 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:9)

rs_ID	r²[population]
rs10143428	1.00[ASN][1000 genomes]
rs11623966	0.93[AFR][1000 genomes];0.98[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11627234	0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11629144	0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17829281	1.00[ASN][1000 genomes]
rs4420467	1.00[ASN][1000 genomes]
rs61095830	0.84[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7140546	0.82[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7143663	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1798800	chr14:69114353-69131030	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer ZNF genes & repeats Genic enhancers Flanking Bivalent TSS/Enh	Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:76 , 50 per page) page: 1 2

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:69115400-69130200	Enhancers	Fetal Stomach	stomach
2	chr14:69120800-69139800	Enhancers	Fetal Muscle Leg	muscle
3	chr14:69122000-69136000	Weak transcription	Sigmoid Colon	Sigmoid Colon
4	chr14:69122200-69131200	Weak transcription	Small Intestine	intestine
5	chr14:69122800-69133600	Weak transcription	Rectal Mucosa Donor 31	rectum
6	chr14:69122800-69133800	Weak transcription	Primary B cells from cord blood	blood
7	chr14:69123000-69130600	Weak transcription	Liver	Liver
8	chr14:69123000-69137800	Weak transcription	Brain Inferior Temporal Lobe	brain
9	chr14:69123200-69131000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
10	chr14:69123800-69130400	Weak transcription	Primary T killer naive cells fromperipheralblood	blood
11	chr14:69124600-69130200	Enhancers	Placenta	Placenta
12	chr14:69124800-69131800	Enhancers	Spleen	Spleen
13	chr14:69126000-69130000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
14	chr14:69126600-69130000	Weak transcription	Adipose Nuclei	Adipose
15	chr14:69126600-69130000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
16	chr14:69126600-69130200	Weak transcription	Cortex derived primary cultured neurospheres	brain
17	chr14:69126600-69130200	Weak transcription	Skeletal Muscle Male	skeletal muscle
18	chr14:69126600-69131000	Weak transcription	HUES6 Cell Line	embryonic stem cell
19	chr14:69126600-69131200	Weak transcription	Brain Anterior Caudate	brain
20	chr14:69126600-69131400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
21	chr14:69126600-69133000	Weak transcription	Gastric	stomach
22	chr14:69126600-69135000	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
23	chr14:69126600-69136000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
24	chr14:69126800-69130000	Weak transcription	Duodenum Mucosa	Duodenum
25	chr14:69126800-69131000	Weak transcription	Fetal Kidney	kidney
26	chr14:69126800-69131200	Weak transcription	Esophagus	oesophagus
27	chr14:69126800-69131200	Weak transcription	Right Atrium	heart
28	chr14:69126800-69131800	Weak transcription	Fetal Intestine Large	intestine
29	chr14:69127000-69131200	Weak transcription	Fetal Intestine Small	intestine
30	chr14:69127000-69132400	Weak transcription	Fetal Thymus	thymus
31	chr14:69127400-69133600	Weak transcription	Pancreas	Pancrea
32	chr14:69127800-69131200	Weak transcription	Left Ventricle	heart
33	chr14:69128000-69130000	Weak transcription	Stomach Smooth Muscle	stomach
34	chr14:69128000-69130000	Enhancers	HSMMtube	muscle
35	chr14:69128000-69134400	Enhancers	Fetal Heart	heart
36	chr14:69128200-69130000	Enhancers	HSMM	muscle
37	chr14:69128200-69130200	Weak transcription	Ovary	ovary
38	chr14:69128200-69131800	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
39	chr14:69128400-69129800	Enhancers	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
40	chr14:69128400-69135200	Enhancers	Muscle Satellite Cultured Cells	--
41	chr14:69128400-69137800	Enhancers	Foreskin Fibroblast Primary Cells skin01	Skin
42	chr14:69128600-69130000	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
43	chr14:69128600-69136400	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
44	chr14:69128800-69135000	Enhancers	Duodenum Smooth Muscle	Duodenum
45	chr14:69129000-69130000	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
46	chr14:69129000-69130400	Enhancers	Fetal Muscle Trunk	muscle
47	chr14:69129000-69131000	Weak transcription	Fetal Lung	lung
48	chr14:69129000-69131200	Weak transcription	Right Ventricle	heart
49	chr14:69129000-69131800	Weak transcription	Aorta	Aorta
50	chr14:69129000-69140200	Enhancers	NHDF-Ad	bronchial

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