Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs1025765	0.96[AFR][1000 genomes];0.93[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs105959	0.88[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10864047	0.82[EUR][1000 genomes]
rs10864048	0.95[EUR][1000 genomes]
rs11120139	0.82[TSI][hapmap];0.82[EUR][1000 genomes]
rs11120146	0.92[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11120147	0.92[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs12045497	0.92[CEU][hapmap]
rs12128616	0.92[CEU][hapmap];0.91[EUR][1000 genomes]
rs12746075	0.95[EUR][1000 genomes]
rs1371286	0.82[EUR][1000 genomes]
rs1371290	0.95[EUR][1000 genomes]
rs1566357	0.92[CEU][hapmap];0.91[MEX][hapmap];0.81[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs1566358	0.82[TSI][hapmap];0.82[EUR][1000 genomes]
rs2165129	0.89[JPT][hapmap];0.86[ASN][1000 genomes]
rs2165133	0.96[AFR][1000 genomes];0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2173482	1.00[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs320374	0.87[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs451083	0.86[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6660266	0.93[ASN][1000 genomes]
rs893664	0.94[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832525	chr1:213580476-213782815	Enhancers Weak transcription Bivalent Enhancer Flanking Active TSS ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	3 gene(s)	inside rSNPs	diseases
2	nsv549179	chr1:213641943-213674732	Bivalent Enhancer Weak transcription Enhancers Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:213664000-213667600	Enhancers	HepG2	liver
2	chr1:213666800-213667200	Bivalent Enhancer	Foreskin Melanocyte Primary Cells skin03	Skin

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