Variant report

Variant rs2188100
Chromosome Location chr6:30181883-30181884
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:30179400-30182400 Active TSS Fetal Intestine Small intestine
2 chr6:30179600-30182200 Active TSS Foreskin Fibroblast Primary Cells skin02 Skin
3 chr6:30179600-30182400 Active TSS Esophagus oesophagus
4 chr6:30179800-30182200 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
5 chr6:30179800-30182200 Active TSS Colonic Mucosa Colon
6 chr6:30179800-30182400 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
7 chr6:30179800-30182400 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
8 chr6:30179800-30182400 Active TSS Aorta Aorta
9 chr6:30179800-30182400 Active TSS A549 lung
10 chr6:30179800-30182600 Flanking Active TSS Primary hematopoietic stem cells blood
11 chr6:30179800-30182600 Active TSS Lung lung
12 chr6:30180000-30182200 Active TSS HUES6 Cell Line embryonic stem cell
13 chr6:30180000-30182200 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
14 chr6:30180000-30182200 Active TSS Fetal Thymus thymus
15 chr6:30180000-30182400 Active TSS H1 Cell Line embryonic stem cell
16 chr6:30180000-30182400 Active TSS HUES48 Cell Line embryonic stem cell
17 chr6:30180000-30182400 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
18 chr6:30180000-30182400 Active TSS Fetal Intestine Large intestine
19 chr6:30180000-30182400 Active TSS Right Ventricle heart
20 chr6:30180000-30182600 Active TSS ES-I3 Cell Line embryonic stem cell
21 chr6:30180000-30182600 Active TSS H9 Cell Line embryonic stem cell
22 chr6:30180000-30182600 Active TSS Psoas Muscle Psoas
23 chr6:30180000-30182600 Active TSS Right Atrium heart
24 chr6:30180200-30182000 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
25 chr6:30180200-30182000 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
26 chr6:30180200-30182200 Active TSS iPS-20b Cell Line embryonic stem cell
27 chr6:30180200-30182200 Active TSS Breast Myoepithelial Primary Cells Breast
28 chr6:30180200-30182200 Active TSS Brain Dorsolateral Prefrontal Cortex brain
29 chr6:30180200-30182400 Active TSS iPS-18 Cell Line embryonic stem cell
30 chr6:30180200-30182400 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr6:30180200-30182400 Active TSS Brain Substantia Nigra brain
32 chr6:30180200-30182400 Active TSS Duodenum Smooth Muscle Duodenum
33 chr6:30180200-30182400 Active TSS Stomach Mucosa stomach
34 chr6:30180200-30182400 Active TSS NHDF-Ad bronchial
35 chr6:30180200-30182400 Active TSS NHLF lung
36 chr6:30180200-30182600 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
37 chr6:30180200-30182600 Active TSS Fetal Lung lung
38 chr6:30180200-30182600 Active TSS HSMMtube muscle
39 chr6:30180200-30182800 Active TSS H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
40 chr6:30180400-30182000 Active TSS Fetal Brain Female brain
41 chr6:30180400-30182200 Active TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
42 chr6:30180400-30182200 Active TSS ES-UCSF4 Cell Line embryonic stem cell
43 chr6:30180400-30182200 Active TSS Brain Anterior Caudate brain
44 chr6:30180400-30182200 Active TSS Fetal Heart heart
45 chr6:30180400-30182200 Active TSS Rectal Smooth Muscle rectum
46 chr6:30180400-30182400 Active TSS ES-WA7 Cell Line embryonic stem cell
47 chr6:30180400-30182400 Active TSS H9 Derived Neuron Cultured Cells ES cell derived
48 chr6:30180400-30182400 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
49 chr6:30180400-30182400 Active TSS Primary T killer memory cells from peripheral blood blood
50 chr6:30180400-30182400 Active TSS Brain Cingulate Gyrus brain

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