The 2.0 version of rSNPBase

Variant report

Variant rs3132656
Chromosome Location chr6:30233739-30233740
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:50 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:30228200-30234200 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
2 chr6:30228200-30237400 Weak transcription Aorta Aorta
3 chr6:30228400-30236800 Weak transcription Brain Hippocampus Middle brain
4 chr6:30228400-30238000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
5 chr6:30228400-30238200 Weak transcription Left Ventricle heart
6 chr6:30228400-30239600 Weak transcription HepG2 liver
7 chr6:30228400-30239800 Weak transcription Colon Smooth Muscle Colon
8 chr6:30228600-30233800 Weak transcription Cortex derived primary cultured neurospheres brain
9 chr6:30228600-30234400 Weak transcription Fetal Brain Female brain
10 chr6:30228600-30236600 Weak transcription Brain Substantia Nigra brain
11 chr6:30228800-30234200 Weak transcription Duodenum Smooth Muscle Duodenum
12 chr6:30228800-30234600 Weak transcription H9 Cell Line embryonic stem cell
13 chr6:30228800-30234600 Weak transcription Breast Myoepithelial Primary Cells Breast
14 chr6:30229000-30234600 Weak transcription Adipose Nuclei Adipose
15 chr6:30229000-30234600 Weak transcription Spleen Spleen
16 chr6:30229200-30235600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
17 chr6:30229400-30234000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr6:30229400-30234800 Weak transcription Primary Natural Killer cells fromperipheralblood blood
19 chr6:30229400-30235200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
20 chr6:30229400-30236400 Weak transcription Fetal Muscle Leg muscle
21 chr6:30229800-30233800 Enhancers Placenta Amnion Placenta Amnion
22 chr6:30229800-30234000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
23 chr6:30229800-30234600 Weak transcription iPS-15b Cell Line embryonic stem cell
24 chr6:30229800-30235000 Weak transcription HUES48 Cell Line embryonic stem cell
25 chr6:30230800-30236200 Weak transcription GM12878-XiMat blood
26 chr6:30231000-30235000 Strong transcription Primary B cells from cord blood blood
27 chr6:30231600-30239600 Weak transcription Brain Angular Gyrus brain
28 chr6:30232000-30234400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
29 chr6:30232200-30234400 Weak transcription Stomach Smooth Muscle stomach
30 chr6:30232200-30235200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr6:30232200-30235800 Weak transcription Brain Anterior Caudate brain
32 chr6:30232800-30235600 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
33 chr6:30233000-30234400 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
34 chr6:30233000-30235200 Weak transcription Primary T cells from cord blood blood
35 chr6:30233200-30234000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
36 chr6:30233200-30234000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
37 chr6:30233200-30234800 Weak transcription Muscle Satellite Cultured Cells --
38 chr6:30233200-30235400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
39 chr6:30233200-30235800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
40 chr6:30233200-30243600 Weak transcription HSMMtube muscle
41 chr6:30233400-30233800 ZNF genes & repeats H1 Cell Line embryonic stem cell
42 chr6:30233400-30233800 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
43 chr6:30233400-30235200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
44 chr6:30233400-30235200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
45 chr6:30233400-30235400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
46 chr6:30233400-30235600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
47 chr6:30233400-30236000 Weak transcription Osteobl bone
48 chr6:30233600-30233800 ZNF genes & repeats hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
49 chr6:30233600-30233800 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
50 chr6:30233600-30235200 Weak transcription Primary B cells from peripheral blood blood

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Last update: Aug 31, 2015