The 2.0 version of rSNPBase

Variant report

Variant rs61619108
Chromosome Location chr6:30285979-30285980
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:30256200-30292000 Weak transcription Fetal Heart heart
2 chr6:30257600-30292800 Weak transcription Fetal Kidney kidney
3 chr6:30259000-30287200 Weak transcription ES-WA7 Cell Line embryonic stem cell
4 chr6:30262600-30292400 Weak transcription Pancreas Pancrea
5 chr6:30262800-30290200 Weak transcription Spleen Spleen
6 chr6:30263000-30293000 Weak transcription Brain Substantia Nigra brain
7 chr6:30264200-30286600 Weak transcription Muscle Satellite Cultured Cells --
8 chr6:30264200-30289800 Weak transcription Gastric stomach
9 chr6:30270600-30292600 Weak transcription Esophagus oesophagus
10 chr6:30270800-30292200 Weak transcription NHDF-Ad bronchial
11 chr6:30271000-30292400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
12 chr6:30271000-30292800 Weak transcription Rectal Smooth Muscle rectum
13 chr6:30271400-30291400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
14 chr6:30272200-30292200 Weak transcription Fetal Brain Male brain
15 chr6:30272400-30289600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
16 chr6:30274600-30292200 Weak transcription Cortex derived primary cultured neurospheres brain
17 chr6:30274600-30292600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
18 chr6:30275200-30286400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
19 chr6:30275400-30286800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
20 chr6:30275400-30293400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
21 chr6:30278200-30292400 Weak transcription Skeletal Muscle Female skeletal muscle
22 chr6:30279400-30287200 Strong transcription GM12878-XiMat blood
23 chr6:30279600-30288400 Strong transcription Fetal Stomach stomach
24 chr6:30279800-30287000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
25 chr6:30279800-30287600 Strong transcription NHEK skin
26 chr6:30280000-30288000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
27 chr6:30280000-30289400 Weak transcription Skeletal Muscle Male skeletal muscle
28 chr6:30280000-30290400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
29 chr6:30280200-30286800 Strong transcription HUES64 Cell Line embryonic stem cell
30 chr6:30280400-30292800 Weak transcription Placenta Amnion Placenta Amnion
31 chr6:30280600-30287400 Strong transcription Monocytes-CD14+_RO01746 blood
32 chr6:30280800-30292000 Weak transcription Pancreatic Islets Pancreatic Islet
33 chr6:30281000-30286800 Strong transcription HepG2 liver
34 chr6:30281200-30292200 Weak transcription Fetal Brain Female brain
35 chr6:30281800-30286200 Weak transcription Small Intestine intestine
36 chr6:30281800-30286400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
37 chr6:30281800-30292000 Weak transcription Brain Hippocampus Middle brain
38 chr6:30281800-30292600 Weak transcription Brain Inferior Temporal Lobe brain
39 chr6:30282000-30288400 Weak transcription Primary neutrophils fromperipheralblood blood
40 chr6:30282000-30289000 Weak transcription HUVEC blood vessel
41 chr6:30282000-30292000 Weak transcription Fetal Lung lung
42 chr6:30282000-30292400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
43 chr6:30282200-30286200 Weak transcription Lung lung
44 chr6:30282200-30286600 Weak transcription Thymus Thymus
45 chr6:30282200-30286800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
46 chr6:30282200-30288400 Weak transcription Adipose Nuclei Adipose
47 chr6:30282200-30289800 Weak transcription Brain Angular Gyrus brain
48 chr6:30282200-30290200 Weak transcription Left Ventricle heart
49 chr6:30282200-30290200 Weak transcription HMEC breast
50 chr6:30282200-30291000 Weak transcription Duodenum Smooth Muscle Duodenum

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Last update: Aug 31, 2015