Variant report

Variant rs57715221
Chromosome Location chr6:30261396-30261397
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:30247600-30262400 ZNF genes & repeats hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
2 chr6:30252200-30262600 ZNF genes & repeats iPS-20b Cell Line embryonic stem cell
3 chr6:30255600-30264000 Strong transcription Duodenum Smooth Muscle Duodenum
4 chr6:30255800-30261400 Weak transcription Primary T killer memory cells from peripheral blood blood
5 chr6:30255800-30264400 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
6 chr6:30256000-30263200 Strong transcription HSMMtube muscle
7 chr6:30256000-30270200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
8 chr6:30256200-30262800 ZNF genes & repeats HUES6 Cell Line embryonic stem cell
9 chr6:30256200-30263800 Strong transcription Fetal Adrenal Gland Adrenal Gland
10 chr6:30256200-30264000 Strong transcription Brain Anterior Caudate brain
11 chr6:30256200-30264800 Strong transcription Primary B cells from peripheral blood blood
12 chr6:30256200-30292000 Weak transcription Fetal Heart heart
13 chr6:30256400-30263200 Strong transcription Brain Inferior Temporal Lobe brain
14 chr6:30256400-30263200 Strong transcription Thymus Thymus
15 chr6:30256400-30263400 Strong transcription Left Ventricle heart
16 chr6:30256400-30263800 Strong transcription Primary T cells fromperipheralblood blood
17 chr6:30256400-30263800 Strong transcription Fetal Intestine Large intestine
18 chr6:30256400-30264000 Strong transcription Rectal Mucosa Donor 29 rectum
19 chr6:30256400-30264200 Strong transcription Skeletal Muscle Female skeletal muscle
20 chr6:30256400-30264200 Strong transcription Stomach Smooth Muscle stomach
21 chr6:30256400-30264400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
22 chr6:30256600-30263600 Strong transcription Rectal Mucosa Donor 31 rectum
23 chr6:30256600-30263800 Strong transcription A549 lung
24 chr6:30256600-30264200 Strong transcription Muscle Satellite Cultured Cells --
25 chr6:30256800-30263200 Strong transcription Primary T helper cells PMA-I stimulated --
26 chr6:30256800-30263800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
27 chr6:30256800-30264400 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
28 chr6:30257000-30261600 Weak transcription Brain Cingulate Gyrus brain
29 chr6:30257000-30262200 Weak transcription Hela-S3 cervix
30 chr6:30257000-30263800 Strong transcription Primary B cells from cord blood blood
31 chr6:30257000-30264000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
32 chr6:30257000-30264000 Strong transcription Primary T helper 17 cells PMA-I stimulated --
33 chr6:30257000-30264000 Strong transcription Placenta Placenta
34 chr6:30257000-30264200 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
35 chr6:30257000-30264200 Strong transcription Primary mononuclear cells fromperipheralblood Blood
36 chr6:30257000-30264200 Strong transcription Fetal Stomach stomach
37 chr6:30257000-30264200 Strong transcription NH-A brain
38 chr6:30257000-30264400 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
39 chr6:30257000-30264400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
40 chr6:30257000-30264400 Strong transcription Fetal Thymus thymus
41 chr6:30257200-30262600 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
42 chr6:30257200-30263000 Strong transcription HSMM muscle
43 chr6:30257200-30263000 Strong transcription Osteobl bone
44 chr6:30257200-30263200 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
45 chr6:30257200-30263400 Strong transcription Fetal Muscle Trunk muscle
46 chr6:30257200-30264200 Strong transcription Breast Myoepithelial Primary Cells Breast
47 chr6:30257200-30264400 Strong transcription Primary T cells from cord blood blood
48 chr6:30257200-30264600 Strong transcription Fetal Muscle Leg muscle
49 chr6:30257400-30261600 Weak transcription Right Ventricle heart
50 chr6:30257400-30264400 Strong transcription Primary hematopoietic stem cells short term culture blood

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