The 2.0 version of rSNPBase

Variant report

Variant rs56725475
Chromosome Location chr6:30287286-30287287
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:30256200-30292000 Weak transcription Fetal Heart heart
2 chr6:30257600-30292800 Weak transcription Fetal Kidney kidney
3 chr6:30262600-30292400 Weak transcription Pancreas Pancrea
4 chr6:30262800-30290200 Weak transcription Spleen Spleen
5 chr6:30263000-30293000 Weak transcription Brain Substantia Nigra brain
6 chr6:30264200-30289800 Weak transcription Gastric stomach
7 chr6:30270600-30292600 Weak transcription Esophagus oesophagus
8 chr6:30270800-30292200 Weak transcription NHDF-Ad bronchial
9 chr6:30271000-30292400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
10 chr6:30271000-30292800 Weak transcription Rectal Smooth Muscle rectum
11 chr6:30271400-30291400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
12 chr6:30272200-30292200 Weak transcription Fetal Brain Male brain
13 chr6:30272400-30289600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
14 chr6:30274600-30292200 Weak transcription Cortex derived primary cultured neurospheres brain
15 chr6:30274600-30292600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
16 chr6:30275400-30293400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr6:30278200-30292400 Weak transcription Skeletal Muscle Female skeletal muscle
18 chr6:30279600-30288400 Strong transcription Fetal Stomach stomach
19 chr6:30279800-30287600 Strong transcription NHEK skin
20 chr6:30280000-30288000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
21 chr6:30280000-30289400 Weak transcription Skeletal Muscle Male skeletal muscle
22 chr6:30280000-30290400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
23 chr6:30280400-30292800 Weak transcription Placenta Amnion Placenta Amnion
24 chr6:30280600-30287400 Strong transcription Monocytes-CD14+_RO01746 blood
25 chr6:30280800-30292000 Weak transcription Pancreatic Islets Pancreatic Islet
26 chr6:30281200-30292200 Weak transcription Fetal Brain Female brain
27 chr6:30281800-30292000 Weak transcription Brain Hippocampus Middle brain
28 chr6:30281800-30292600 Weak transcription Brain Inferior Temporal Lobe brain
29 chr6:30282000-30288400 Weak transcription Primary neutrophils fromperipheralblood blood
30 chr6:30282000-30289000 Weak transcription HUVEC blood vessel
31 chr6:30282000-30292000 Weak transcription Fetal Lung lung
32 chr6:30282000-30292400 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
33 chr6:30282200-30288400 Weak transcription Adipose Nuclei Adipose
34 chr6:30282200-30289800 Weak transcription Brain Angular Gyrus brain
35 chr6:30282200-30290200 Weak transcription Left Ventricle heart
36 chr6:30282200-30290200 Weak transcription HMEC breast
37 chr6:30282200-30291000 Weak transcription Duodenum Smooth Muscle Duodenum
38 chr6:30282200-30292200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
39 chr6:30282200-30292400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
40 chr6:30282200-30292400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
41 chr6:30282200-30292600 Weak transcription Right Ventricle heart
42 chr6:30282200-30292800 Weak transcription Brain Anterior Caudate brain
43 chr6:30282200-30292800 Weak transcription Brain Cingulate Gyrus brain
44 chr6:30282200-30292800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
45 chr6:30282400-30291000 Weak transcription Brain Germinal Matrix brain
46 chr6:30282600-30292400 Weak transcription Psoas Muscle Psoas
47 chr6:30284200-30288000 Weak transcription Right Atrium heart
48 chr6:30284200-30290200 Weak transcription Ovary ovary
49 chr6:30284200-30292400 Weak transcription Colonic Mucosa Colon
50 chr6:30284400-30289800 Weak transcription NHLF lung

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Last update: Aug 31, 2015