Variant report

rSNPs within LD-proxies of this variant (count:28)

rs_ID	r²[population]
rs10231405	0.80[CHB][hapmap]
rs10231612	1.00[CEU][hapmap]
rs10272697	0.83[CHB][hapmap]
rs10277802	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.91[AMR][1000 genomes];0.87[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10282622	1.00[CEU][hapmap]
rs10487175	1.00[CEU][hapmap]
rs12154742	0.87[ASN][1000 genomes]
rs16872993	1.00[CEU][hapmap];0.83[AMR][1000 genomes]
rs16873008	1.00[CEU][hapmap]
rs2192305	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[AFR][1000 genomes];0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2299401	0.81[CHB][hapmap]
rs2299402	1.00[CEU][hapmap]
rs2299403	0.81[CHB][hapmap]
rs3213725	1.00[CEU][hapmap]
rs41434053	0.83[CHB][hapmap]
rs55833200	0.91[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs57179739	0.91[AMR][1000 genomes];0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs58352612	0.91[AMR][1000 genomes];0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs58751603	0.83[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs59086068	0.91[AMR][1000 genomes];0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6465945	0.81[CHB][hapmap]
rs73712299	0.89[AMR][1000 genomes];0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs73712300	0.83[AMR][1000 genomes];0.80[EUR][1000 genomes]
rs73712302	0.80[EUR][1000 genomes]
rs73715903	0.83[AMR][1000 genomes]
rs7781289	0.96[YRI][hapmap];0.82[AFR][1000 genomes]
rs7792066	0.85[CHB][hapmap]
rs7797395	0.83[CHB][hapmap]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv1843940	chr7:103421702-103590285	Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers Active TSS ZNF genes & repeats	Chromatin interactive region	2 gene(s)	inside rSNPs	diseases
2	nsv523466	chr7:103547135-103567525	Strong transcription Enhancers Weak transcription ZNF genes & repeats Genic enhancers Flanking Active TSS	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
3	nsv933391	chr7:103557392-103588539	Weak transcription Flanking Active TSS Enhancers Strong transcription	Chromatin interactive region	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:103556800-103574400	Weak transcription	HepG2	liver
2	chr7:103558800-103561600	Flanking Active TSS	K562	blood

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