Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10140699	0.86[CEU][hapmap]
rs17107424	1.00[YRI][hapmap]
rs17107429	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17107436	1.00[CEU][hapmap];0.87[EUR][1000 genomes]
rs17107444	1.00[YRI][hapmap]
rs17107446	1.00[CEU][hapmap];0.87[EUR][1000 genomes]
rs17107482	0.88[CEU][hapmap]
rs2052201	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs214028	1.00[CEU][hapmap];0.87[EUR][1000 genomes]
rs214029	1.00[CEU][hapmap];0.84[EUR][1000 genomes]
rs214030	1.00[CEU][hapmap];0.87[EUR][1000 genomes]
rs214031	1.00[CEU][hapmap];0.87[EUR][1000 genomes]
rs2192416	0.86[CEU][hapmap]
rs2192420	0.88[CEU][hapmap]
rs2215835	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4903753	1.00[CHB][hapmap];1.00[JPT][hapmap]
rs6574438	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs7152492	0.86[CEU][hapmap]
rs73327202	0.81[EUR][1000 genomes]
rs976330	1.00[CHB][hapmap];1.00[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv832837	chr14:78766805-78946526	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr14:78813800-78820200	Weak transcription	Brain Germinal Matrix	brain
2	chr14:78814600-78825600	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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