The 2.0 version of rSNPBase

Variant report

Variant rs223228
Chromosome Location chr6:143815127-143815128
allele A/C/G/T
Outlinks Ensembl   UCSC
Chromatin state (count:119 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:143772600-143832000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr6:143772800-143821200 Weak transcription Psoas Muscle Psoas
3 chr6:143773200-143827000 Weak transcription Brain Germinal Matrix brain
4 chr6:143773400-143818200 Weak transcription Cortex derived primary cultured neurospheres brain
5 chr6:143773400-143832000 Weak transcription Fetal Brain Male brain
6 chr6:143774400-143819400 Weak transcription Primary T killer memory cells from peripheral blood blood
7 chr6:143779000-143818200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
8 chr6:143779200-143816800 Weak transcription Placenta Amnion Placenta Amnion
9 chr6:143781000-143832000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
10 chr6:143783200-143818400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
11 chr6:143790200-143831600 Weak transcription Esophagus oesophagus
12 chr6:143790200-143831600 Weak transcription Gastric stomach
13 chr6:143793600-143819400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
14 chr6:143794400-143816000 Weak transcription Brain Substantia Nigra brain
15 chr6:143794600-143819400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
16 chr6:143794800-143817800 Weak transcription HSMMtube muscle
17 chr6:143795200-143827400 Weak transcription Aorta Aorta
18 chr6:143795800-143831800 Weak transcription ES-WA7 Cell Line embryonic stem cell
19 chr6:143797000-143826600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
20 chr6:143797400-143815200 Weak transcription Fetal Lung lung
21 chr6:143797400-143819200 Weak transcription Primary T helper naive cells from peripheral blood blood
22 chr6:143797600-143831000 Weak transcription Skeletal Muscle Male skeletal muscle
23 chr6:143798000-143817200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
24 chr6:143798200-143819400 Weak transcription Fetal Thymus thymus
25 chr6:143798400-143819400 Weak transcription Primary T helper naive cells fromperipheralblood blood
26 chr6:143798800-143819600 Weak transcription Fetal Brain Female brain
27 chr6:143798800-143821400 Weak transcription HMEC breast
28 chr6:143799000-143827000 Weak transcription Brain Cingulate Gyrus brain
29 chr6:143799400-143816600 Weak transcription Fetal Muscle Leg muscle
30 chr6:143799400-143819200 Weak transcription Primary T helper cells PMA-I stimulated --
31 chr6:143799600-143815200 Weak transcription Primary T regulatory cells fromperipheralblood blood
32 chr6:143799600-143815200 Weak transcription Fetal Kidney kidney
33 chr6:143800200-143815200 Weak transcription Primary hematopoietic stem cells blood
34 chr6:143800600-143818000 Weak transcription Primary T cells fromperipheralblood blood
35 chr6:143800800-143831000 Weak transcription Colon Smooth Muscle Colon
36 chr6:143801200-143819400 Weak transcription Dnd41 blood
37 chr6:143802200-143818600 Weak transcription Primary T helper cells fromperipheralblood blood
38 chr6:143803400-143816000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
39 chr6:143805200-143827800 Weak transcription Fetal Heart heart
40 chr6:143807600-143815200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
41 chr6:143808000-143818200 Weak transcription Brain Angular Gyrus brain
42 chr6:143808600-143818400 Weak transcription Primary B cells from cord blood blood
43 chr6:143809800-143817600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
44 chr6:143810800-143816000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
45 chr6:143811400-143832000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
46 chr6:143811800-143829400 Strong transcription Monocytes-CD14+_RO01746 blood
47 chr6:143812000-143827400 Weak transcription Pancreas Pancrea
48 chr6:143812200-143819400 Weak transcription Thymus Thymus
49 chr6:143812200-143831600 Weak transcription Right Ventricle heart
50 chr6:143812400-143815200 Weak transcription iPS-18 Cell Line embryonic stem cell

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Last update: Aug 31, 2015