The 2.0 version of rSNPBase

Variant report

Variant rs2251597
Chromosome Location chr1:160987847-160987848
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:91 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:160983600-160989400 Enhancers Placenta Placenta
2 chr1:160984200-160988000 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
3 chr1:160984200-160988000 Weak transcription Pancreatic Islets Pancreatic Islet
4 chr1:160984200-160988200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
5 chr1:160984200-160989400 Weak transcription Primary T helper naive cells from peripheral blood blood
6 chr1:160984200-160989600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
7 chr1:160984200-160989600 Weak transcription Brain Anterior Caudate brain
8 chr1:160984200-160989800 Enhancers Fetal Adrenal Gland Adrenal Gland
9 chr1:160984400-160988600 Weak transcription Primary B cells from peripheral blood blood
10 chr1:160984400-160989000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
11 chr1:160984400-160989400 Weak transcription Primary T cells from cord blood blood
12 chr1:160984400-160989400 Weak transcription Primary T killer naive cells fromperipheralblood blood
13 chr1:160984400-160989400 Weak transcription Primary T killer memory cells from peripheral blood blood
14 chr1:160984400-160989400 Weak transcription Fetal Kidney kidney
15 chr1:160984400-160989600 Weak transcription Primary T helper naive cells fromperipheralblood blood
16 chr1:160984400-160989600 Weak transcription Primary T regulatory cells fromperipheralblood blood
17 chr1:160984400-160989800 Weak transcription Primary T cells fromperipheralblood blood
18 chr1:160984400-160989800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
19 chr1:160984400-160989800 Weak transcription Right Ventricle heart
20 chr1:160984400-160990800 Weak transcription HSMMtube muscle
21 chr1:160984400-160991000 Weak transcription HSMM muscle
22 chr1:160984600-160988400 Weak transcription Colonic Mucosa Colon
23 chr1:160984600-160989000 Weak transcription Primary T helper cells PMA-I stimulated --
24 chr1:160985600-160989400 Enhancers Placenta Amnion Placenta Amnion
25 chr1:160986400-160988400 Enhancers ES-UCSF4 Cell Line embryonic stem cell
26 chr1:160986400-160988800 Enhancers Gastric stomach
27 chr1:160986400-160989600 Enhancers Primary monocytes fromperipheralblood blood
28 chr1:160986400-160989800 Enhancers Pancreas Pancrea
29 chr1:160987000-160988200 Enhancers Liver Liver
30 chr1:160987000-160988600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr1:160987400-160988000 Genic enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
32 chr1:160987400-160988000 Enhancers HMEC breast
33 chr1:160987400-160988200 Enhancers Hela-S3 cervix
34 chr1:160987400-160988400 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
35 chr1:160987400-160988600 Enhancers Primary hematopoietic stem cells short term culture blood
36 chr1:160987400-160988600 Enhancers HUVEC blood vessel
37 chr1:160987400-160988800 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
38 chr1:160987400-160989000 Enhancers Breast Myoepithelial Primary Cells Breast
39 chr1:160987400-160989000 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
40 chr1:160987400-160989400 Enhancers Stomach Mucosa stomach
41 chr1:160987600-160988000 Flanking Active TSS H9 Cell Line embryonic stem cell
42 chr1:160987600-160988000 Transcr. at gene 5' and 3' HUES6 Cell Line embryonic stem cell
43 chr1:160987600-160988000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
44 chr1:160987600-160988000 Enhancers Primary mononuclear cells fromperipheralblood Blood
45 chr1:160987600-160988000 Enhancers Left Ventricle heart
46 chr1:160987600-160988000 Flanking Active TSS Lung lung
47 chr1:160987600-160988200 Enhancers Primary Natural Killer cells fromperipheralblood blood
48 chr1:160987600-160988200 Flanking Active TSS Esophagus oesophagus
49 chr1:160987600-160988200 Transcr. at gene 5' and 3' Fetal Intestine Small intestine
50 chr1:160987600-160988200 Enhancers Small Intestine intestine

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Last update: Aug 31, 2015