The 2.0 version of rSNPBase

Variant report

Variant rs17388108
Chromosome Location chr1:160977702-160977703
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:90 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:160960400-160978400 Weak transcription Fetal Lung lung
2 chr1:160960600-160981600 Weak transcription Primary T killer naive cells fromperipheralblood blood
3 chr1:160963400-160983000 Weak transcription HSMMtube muscle
4 chr1:160967800-160978200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
5 chr1:160967800-160978800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
6 chr1:160969800-160978400 Weak transcription A549 lung
7 chr1:160970000-160982800 Weak transcription ES-I3 Cell Line embryonic stem cell
8 chr1:160970600-160981800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
9 chr1:160970600-160981800 Weak transcription Duodenum Smooth Muscle Duodenum
10 chr1:160970600-160982400 Weak transcription Dnd41 blood
11 chr1:160970600-160982600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
12 chr1:160970600-160983000 Weak transcription Fetal Muscle Trunk muscle
13 chr1:160970600-160983000 Weak transcription Rectal Smooth Muscle rectum
14 chr1:160970600-160983000 Weak transcription Skeletal Muscle Female skeletal muscle
15 chr1:160970800-160981600 Weak transcription Primary T killer memory cells from peripheral blood blood
16 chr1:160970800-160982600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
17 chr1:160970800-160983000 Weak transcription HSMM muscle
18 chr1:160971000-160977800 Weak transcription Placenta Amnion Placenta Amnion
19 chr1:160971000-160979400 Weak transcription Ovary ovary
20 chr1:160971000-160981400 Weak transcription Primary T cells fromperipheralblood blood
21 chr1:160971000-160981400 Weak transcription Primary T helper naive cells from peripheral blood blood
22 chr1:160971000-160981600 Weak transcription Primary monocytes fromperipheralblood blood
23 chr1:160971000-160982000 Weak transcription GM12878-XiMat blood
24 chr1:160971000-160982600 Weak transcription Thymus Thymus
25 chr1:160971000-160983200 Weak transcription Pancreatic Islets Pancreatic Islet
26 chr1:160971200-160981200 Weak transcription Primary T helper naive cells fromperipheralblood blood
27 chr1:160971200-160981800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
28 chr1:160971200-160981800 Weak transcription Primary B cells from peripheral blood blood
29 chr1:160971200-160981800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
30 chr1:160971200-160981800 Weak transcription Fetal Thymus thymus
31 chr1:160971200-160982800 Weak transcription Sigmoid Colon Sigmoid Colon
32 chr1:160971200-160983000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
33 chr1:160971200-160983000 Weak transcription Colonic Mucosa Colon
34 chr1:160971400-160978400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
35 chr1:160971400-160978800 Weak transcription Primary hematopoietic stem cells short term culture blood
36 chr1:160971400-160981200 Weak transcription Primary B cells from cord blood blood
37 chr1:160971400-160981400 Weak transcription Primary hematopoietic stem cells blood
38 chr1:160971400-160981800 Weak transcription Small Intestine intestine
39 chr1:160971400-160983000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
40 chr1:160971600-160978400 Weak transcription Esophagus oesophagus
41 chr1:160971600-160978600 Weak transcription Fetal Intestine Large intestine
42 chr1:160971600-160981000 Weak transcription Monocytes-CD14+_RO01746 blood
43 chr1:160971600-160981600 Weak transcription Primary T helper cells PMA-I stimulated --
44 chr1:160971600-160982600 Weak transcription Primary T regulatory cells fromperipheralblood blood
45 chr1:160971600-160983000 Weak transcription Left Ventricle heart
46 chr1:160971800-160978400 Weak transcription Primary neutrophils fromperipheralblood blood
47 chr1:160971800-160978400 Weak transcription Adipose Nuclei Adipose
48 chr1:160971800-160978600 Weak transcription Breast Myoepithelial Primary Cells Breast
49 chr1:160971800-160978800 Weak transcription HepG2 liver
50 chr1:160971800-160981200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --

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Last update: Aug 31, 2015