The 2.0 version of rSNPBase

Variant report

Variant rs2988726
Chromosome Location chr1:160978754-160978755
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:93 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:160960600-160981600 Weak transcription Primary T killer naive cells fromperipheralblood blood
2 chr1:160963400-160983000 Weak transcription HSMMtube muscle
3 chr1:160967800-160978800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
4 chr1:160970000-160982800 Weak transcription ES-I3 Cell Line embryonic stem cell
5 chr1:160970600-160981800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
6 chr1:160970600-160981800 Weak transcription Duodenum Smooth Muscle Duodenum
7 chr1:160970600-160982400 Weak transcription Dnd41 blood
8 chr1:160970600-160982600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
9 chr1:160970600-160983000 Weak transcription Fetal Muscle Trunk muscle
10 chr1:160970600-160983000 Weak transcription Rectal Smooth Muscle rectum
11 chr1:160970600-160983000 Weak transcription Skeletal Muscle Female skeletal muscle
12 chr1:160970800-160981600 Weak transcription Primary T killer memory cells from peripheral blood blood
13 chr1:160970800-160982600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
14 chr1:160970800-160983000 Weak transcription HSMM muscle
15 chr1:160971000-160979400 Weak transcription Ovary ovary
16 chr1:160971000-160981400 Weak transcription Primary T cells fromperipheralblood blood
17 chr1:160971000-160981400 Weak transcription Primary T helper naive cells from peripheral blood blood
18 chr1:160971000-160981600 Weak transcription Primary monocytes fromperipheralblood blood
19 chr1:160971000-160982000 Weak transcription GM12878-XiMat blood
20 chr1:160971000-160982600 Weak transcription Thymus Thymus
21 chr1:160971000-160983200 Weak transcription Pancreatic Islets Pancreatic Islet
22 chr1:160971200-160981200 Weak transcription Primary T helper naive cells fromperipheralblood blood
23 chr1:160971200-160981800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
24 chr1:160971200-160981800 Weak transcription Primary B cells from peripheral blood blood
25 chr1:160971200-160981800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
26 chr1:160971200-160981800 Weak transcription Fetal Thymus thymus
27 chr1:160971200-160982800 Weak transcription Sigmoid Colon Sigmoid Colon
28 chr1:160971200-160983000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
29 chr1:160971200-160983000 Weak transcription Colonic Mucosa Colon
30 chr1:160971400-160978800 Weak transcription Primary hematopoietic stem cells short term culture blood
31 chr1:160971400-160981200 Weak transcription Primary B cells from cord blood blood
32 chr1:160971400-160981400 Weak transcription Primary hematopoietic stem cells blood
33 chr1:160971400-160981800 Weak transcription Small Intestine intestine
34 chr1:160971400-160983000 Weak transcription Primary mononuclear cells fromperipheralblood Blood
35 chr1:160971600-160981000 Weak transcription Monocytes-CD14+_RO01746 blood
36 chr1:160971600-160981600 Weak transcription Primary T helper cells PMA-I stimulated --
37 chr1:160971600-160982600 Weak transcription Primary T regulatory cells fromperipheralblood blood
38 chr1:160971600-160983000 Weak transcription Left Ventricle heart
39 chr1:160971800-160978800 Weak transcription HepG2 liver
40 chr1:160971800-160981200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
41 chr1:160971800-160981400 Weak transcription Primary T helper cells fromperipheralblood blood
42 chr1:160971800-160982800 Weak transcription H1 Cell Line embryonic stem cell
43 chr1:160971800-160982800 Weak transcription HMEC breast
44 chr1:160971800-160983000 Weak transcription Fetal Stomach stomach
45 chr1:160972200-160981000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
46 chr1:160972400-160978800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
47 chr1:160972400-160978800 Weak transcription Rectal Mucosa Donor 29 rectum
48 chr1:160972400-160981600 Weak transcription iPS-20b Cell Line embryonic stem cell
49 chr1:160972600-160978800 Strong transcription Fetal Intestine Small intestine
50 chr1:160972600-160983000 Weak transcription HUES48 Cell Line embryonic stem cell

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Last update: Aug 31, 2015