The 2.0 version of rSNPBase

Variant report

Variant rs2483145
Chromosome Location chr1:160972221-160972222
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:98 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:160960400-160978400 Weak transcription Fetal Lung lung
2 chr1:160960600-160977400 Weak transcription Fetal Kidney kidney
3 chr1:160960600-160981600 Weak transcription Primary T killer naive cells fromperipheralblood blood
4 chr1:160963400-160983000 Weak transcription HSMMtube muscle
5 chr1:160964400-160972600 Strong transcription HUES48 Cell Line embryonic stem cell
6 chr1:160965400-160972600 Strong transcription HUES64 Cell Line embryonic stem cell
7 chr1:160966800-160972600 Strong transcription iPS-18 Cell Line embryonic stem cell
8 chr1:160967000-160972400 Strong transcription Rectal Mucosa Donor 29 rectum
9 chr1:160967400-160972400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
10 chr1:160967600-160972600 Strong transcription HUES6 Cell Line embryonic stem cell
11 chr1:160967800-160978200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
12 chr1:160967800-160978800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
13 chr1:160968000-160976800 Weak transcription Brain Angular Gyrus brain
14 chr1:160968200-160972400 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
15 chr1:160968200-160972600 Strong transcription K562 blood
16 chr1:160969600-160972600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
17 chr1:160969800-160978400 Weak transcription A549 lung
18 chr1:160970000-160974000 Weak transcription Brain Cingulate Gyrus brain
19 chr1:160970000-160982800 Weak transcription ES-I3 Cell Line embryonic stem cell
20 chr1:160970400-160972400 Genic enhancers Duodenum Mucosa Duodenum
21 chr1:160970400-160976000 Weak transcription Stomach Mucosa stomach
22 chr1:160970600-160972400 Weak transcription Aorta Aorta
23 chr1:160970600-160972600 Genic enhancers Fetal Intestine Small intestine
24 chr1:160970600-160981800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
25 chr1:160970600-160981800 Weak transcription Duodenum Smooth Muscle Duodenum
26 chr1:160970600-160982400 Weak transcription Dnd41 blood
27 chr1:160970600-160982600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
28 chr1:160970600-160983000 Weak transcription Fetal Muscle Trunk muscle
29 chr1:160970600-160983000 Weak transcription Rectal Smooth Muscle rectum
30 chr1:160970600-160983000 Weak transcription Skeletal Muscle Female skeletal muscle
31 chr1:160970800-160972600 Weak transcription Fetal Brain Female brain
32 chr1:160970800-160972800 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
33 chr1:160970800-160974200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr1:160970800-160974800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
35 chr1:160970800-160981600 Weak transcription Primary T killer memory cells from peripheral blood blood
36 chr1:160970800-160982600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
37 chr1:160970800-160983000 Weak transcription HSMM muscle
38 chr1:160971000-160973400 Weak transcription Skeletal Muscle Male skeletal muscle
39 chr1:160971000-160976000 Weak transcription Lung lung
40 chr1:160971000-160977400 Weak transcription HUVEC blood vessel
41 chr1:160971000-160977800 Weak transcription Placenta Amnion Placenta Amnion
42 chr1:160971000-160979400 Weak transcription Ovary ovary
43 chr1:160971000-160981400 Weak transcription Primary T cells fromperipheralblood blood
44 chr1:160971000-160981400 Weak transcription Primary T helper naive cells from peripheral blood blood
45 chr1:160971000-160981600 Weak transcription Primary monocytes fromperipheralblood blood
46 chr1:160971000-160982000 Weak transcription GM12878-XiMat blood
47 chr1:160971000-160982600 Weak transcription Thymus Thymus
48 chr1:160971000-160983200 Weak transcription Pancreatic Islets Pancreatic Islet
49 chr1:160971200-160973000 Weak transcription Brain Germinal Matrix brain
50 chr1:160971200-160976000 Weak transcription Stomach Smooth Muscle stomach

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Last update: Aug 31, 2015