The 2.0 version of rSNPBase

Variant report

Variant rs2278537
Chromosome Location chr2:86258312-86258313
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr2:86245400-86263400 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr2:86250800-86262200 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
3 chr2:86251000-86261000 Strong transcription Primary hematopoietic stem cells short term culture blood
4 chr2:86251000-86262000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
5 chr2:86251000-86262600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
6 chr2:86251000-86262800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr2:86251200-86261600 Strong transcription NH-A brain
8 chr2:86251200-86261800 Strong transcription Cortex derived primary cultured neurospheres brain
9 chr2:86251200-86262400 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
10 chr2:86251200-86262800 Strong transcription Fetal Brain Female brain
11 chr2:86251200-86263200 Strong transcription A549 lung
12 chr2:86251200-86273200 Strong transcription Breast Myoepithelial Primary Cells Breast
13 chr2:86251200-86281400 Strong transcription H9 Cell Line embryonic stem cell
14 chr2:86251200-86283000 Strong transcription HepG2 liver
15 chr2:86251200-86283200 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
16 chr2:86251200-86285000 Strong transcription HUES6 Cell Line embryonic stem cell
17 chr2:86251200-86285200 Strong transcription iPS-20b Cell Line embryonic stem cell
18 chr2:86251400-86261000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
19 chr2:86251400-86261000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
20 chr2:86251400-86261200 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
21 chr2:86251400-86262000 Strong transcription Osteobl bone
22 chr2:86251400-86262800 Strong transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
23 chr2:86251400-86263400 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
24 chr2:86251600-86261600 Strong transcription HMEC breast
25 chr2:86251800-86259400 Strong transcription Primary T helper cells fromperipheralblood blood
26 chr2:86251800-86262000 Strong transcription Sigmoid Colon Sigmoid Colon
27 chr2:86251800-86262400 Strong transcription Fetal Intestine Small intestine
28 chr2:86252000-86262000 Strong transcription H1 Derived Mesenchymal Stem Cells ES cell derived
29 chr2:86252000-86331200 Strong transcription HUES64 Cell Line embryonic stem cell
30 chr2:86252200-86262000 Strong transcription GM12878-XiMat blood
31 chr2:86252200-86262400 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
32 chr2:86252200-86262600 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
33 chr2:86252200-86282600 Strong transcription iPS-18 Cell Line embryonic stem cell
34 chr2:86252200-86285200 Strong transcription HUES48 Cell Line embryonic stem cell
35 chr2:86252400-86258800 Strong transcription Primary T helper naive cells fromperipheralblood blood
36 chr2:86252400-86261000 Strong transcription Dnd41 blood
37 chr2:86252400-86261600 Strong transcription Esophagus oesophagus
38 chr2:86252400-86262200 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
39 chr2:86252400-86262400 Strong transcription Foreskin Fibroblast Primary Cells skin01 Skin
40 chr2:86252400-86262400 Strong transcription NHEK skin
41 chr2:86252400-86262600 Strong transcription Rectal Mucosa Donor 31 rectum
42 chr2:86252400-86263000 Strong transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
43 chr2:86252400-86283200 Strong transcription H1 Cell Line embryonic stem cell
44 chr2:86252600-86259000 Strong transcription Primary T cells fromperipheralblood blood
45 chr2:86252600-86259400 Strong transcription Primary B cells from cord blood blood
46 chr2:86252600-86260200 Strong transcription Primary mononuclear cells fromperipheralblood Blood
47 chr2:86252600-86260800 Strong transcription Ovary ovary
48 chr2:86252600-86261000 Strong transcription Primary T helper 17 cells PMA-I stimulated --
49 chr2:86252600-86261600 Strong transcription Pancreas Pancrea
50 chr2:86252600-86262600 Strong transcription Hela-S3 cervix

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Last update: Aug 31, 2015