Variant report

Variant rs2281027
Chromosome Location chr6:26446705-26446706
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:85 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:26441200-26449600 Weak transcription Esophagus oesophagus
2 chr6:26441200-26457000 Weak transcription Brain Substantia Nigra brain
3 chr6:26441200-26457600 Weak transcription Pancreas Pancrea
4 chr6:26441400-26448200 Weak transcription Right Ventricle heart
5 chr6:26441400-26453000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
6 chr6:26441400-26455600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
7 chr6:26441400-26457000 Weak transcription Brain Anterior Caudate brain
8 chr6:26441400-26457400 Weak transcription Psoas Muscle Psoas
9 chr6:26441600-26448000 Weak transcription Placenta Placenta
10 chr6:26441600-26448800 Weak transcription Fetal Intestine Large intestine
11 chr6:26441600-26451200 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
12 chr6:26441600-26452400 Weak transcription HSMMtube muscle
13 chr6:26441600-26452800 Weak transcription HSMM muscle
14 chr6:26442200-26447000 Weak transcription Fetal Intestine Small intestine
15 chr6:26442200-26449200 Weak transcription HUVEC blood vessel
16 chr6:26442200-26455800 Weak transcription HepG2 liver
17 chr6:26442200-26457400 Weak transcription Fetal Kidney kidney
18 chr6:26442400-26448000 Weak transcription Primary hematopoietic stem cells blood
19 chr6:26442400-26457400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr6:26442400-26457400 Weak transcription Hela-S3 cervix
21 chr6:26442600-26450000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
22 chr6:26442600-26457400 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
23 chr6:26442800-26454600 Weak transcription NHDF-Ad bronchial
24 chr6:26443000-26448400 Weak transcription Colonic Mucosa Colon
25 chr6:26443000-26450000 Weak transcription Duodenum Smooth Muscle Duodenum
26 chr6:26443000-26457400 Weak transcription Stomach Mucosa stomach
27 chr6:26444200-26448400 Genic enhancers Primary T cells fromperipheralblood blood
28 chr6:26444400-26447200 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
29 chr6:26444400-26447200 Genic enhancers Primary T cells effector/memory enriched fromperipheralblood blood
30 chr6:26444400-26447400 Strong transcription Liver Liver
31 chr6:26444400-26447800 Genic enhancers Primary T helper cells PMA-I stimulated --
32 chr6:26444400-26448000 Genic enhancers Primary T helper memory cells from peripheral blood 2 blood
33 chr6:26444400-26448200 Genic enhancers Primary T helper memory cells from peripheral blood 1 blood
34 chr6:26444400-26451000 Strong transcription Fetal Muscle Trunk muscle
35 chr6:26444400-26452000 Strong transcription Fetal Adrenal Gland Adrenal Gland
36 chr6:26444400-26452600 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
37 chr6:26444400-26453000 Strong transcription Fetal Stomach stomach
38 chr6:26444600-26446800 Strong transcription Rectal Mucosa Donor 29 rectum
39 chr6:26444600-26447000 Genic enhancers Primary T cells from cord blood blood
40 chr6:26444600-26447000 Genic enhancers Primary mononuclear cells fromperipheralblood Blood
41 chr6:26444600-26447400 Genic enhancers Primary T helper cells fromperipheralblood blood
42 chr6:26444600-26447600 Strong transcription Fetal Lung lung
43 chr6:26444600-26452000 Strong transcription Fetal Muscle Leg muscle
44 chr6:26444600-26453000 Strong transcription Primary monocytes fromperipheralblood blood
45 chr6:26444800-26447000 Strong transcription Stomach Smooth Muscle stomach
46 chr6:26444800-26447200 Genic enhancers Fetal Thymus thymus
47 chr6:26445000-26446800 Genic enhancers Primary B cells from peripheral blood blood
48 chr6:26445000-26449600 Weak transcription Rectal Mucosa Donor 31 rectum
49 chr6:26445000-26454600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
50 chr6:26445200-26449600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin

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