Variant report

Variant	rs2303877
Chromosome Location	chr2:167976035-167976036
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 33 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:32)

rs_ID	r²[population]
rs12104632	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16852938	1.00[CEU][hapmap];0.91[GIH][hapmap];0.88[JPT][hapmap];0.87[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs16853187	0.86[EUR][1000 genomes]
rs16853195	1.00[CEU][hapmap];0.82[GIH][hapmap];0.83[TSI][hapmap];0.86[EUR][1000 genomes]
rs55844329	0.86[EUR][1000 genomes]
rs57471298	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs58234151	0.86[EUR][1000 genomes]
rs58530903	0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs58784178	0.86[EUR][1000 genomes]
rs58821409	1.00[AFR][1000 genomes];0.90[AMR][1000 genomes];0.91[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs59196742	0.82[EUR][1000 genomes]
rs59394610	0.86[AMR][1000 genomes];0.82[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs60016563	0.86[EUR][1000 genomes]
rs60159463	0.86[EUR][1000 genomes]
rs60543052	0.86[EUR][1000 genomes]
rs60661347	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60789884	0.86[EUR][1000 genomes]
rs60851700	0.86[EUR][1000 genomes]
rs60893609	0.86[EUR][1000 genomes]
rs61164055	0.86[EUR][1000 genomes]
rs6432978	1.00[CEU][hapmap];0.90[CHB][hapmap];0.87[CHD][hapmap];0.95[GIH][hapmap];1.00[TSI][hapmap];0.82[YRI][hapmap];0.81[AMR][1000 genomes];0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs73015922	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];0.82[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73015953	0.94[AFR][1000 genomes];0.80[AMR][1000 genomes];0.91[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs73015970	0.86[EUR][1000 genomes]
rs73019961	0.86[EUR][1000 genomes]
rs73025714	0.86[EUR][1000 genomes]
rs73027829	0.86[EUR][1000 genomes]
rs73027847	0.86[EUR][1000 genomes]
rs73029714	0.86[EUR][1000 genomes]
rs73970887	0.86[EUR][1000 genomes]
rs7560840	0.86[EUR][1000 genomes]
rs7607357	0.81[ASW][hapmap];1.00[CEU][hapmap];0.91[GIH][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv875376	chr2:167844513-168037489	Weak transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats	TF binding region Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:167973000-167978200	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
2	chr2:167973200-167978000	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Male	--

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