The 2.0 version of rSNPBase

Variant report

Variant rs2348731
Chromosome Location chr1:165646345-165646346
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:165606200-165659600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr1:165618200-165652400 Strong transcription Fetal Muscle Leg muscle
3 chr1:165619200-165648800 Strong transcription Liver Liver
4 chr1:165619600-165653200 Strong transcription Breast Myoepithelial Primary Cells Breast
5 chr1:165623400-165653000 Weak transcription Stomach Mucosa stomach
6 chr1:165628000-165646600 Strong transcription Primary T cells from cord blood blood
7 chr1:165628800-165646800 Strong transcription Primary T helper cells fromperipheralblood blood
8 chr1:165628800-165646800 Strong transcription Primary T regulatory cells fromperipheralblood blood
9 chr1:165629000-165653600 Strong transcription Dnd41 blood
10 chr1:165629400-165652800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
11 chr1:165629400-165654200 Weak transcription iPS-15b Cell Line embryonic stem cell
12 chr1:165629400-165656000 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
13 chr1:165629600-165654800 Strong transcription Primary T cells fromperipheralblood blood
14 chr1:165629800-165654800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
15 chr1:165630000-165654400 Strong transcription Primary B cells from peripheral blood blood
16 chr1:165632400-165649400 Weak transcription ES-I3 Cell Line embryonic stem cell
17 chr1:165633600-165651200 Weak transcription Pancreas Pancrea
18 chr1:165633600-165651400 Weak transcription Gastric stomach
19 chr1:165633800-165651000 Weak transcription Small Intestine intestine
20 chr1:165634400-165651800 Weak transcription Fetal Heart heart
21 chr1:165635200-165647800 Weak transcription Brain Cingulate Gyrus brain
22 chr1:165635800-165648600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
23 chr1:165636000-165652400 Strong transcription Fetal Adrenal Gland Adrenal Gland
24 chr1:165637800-165648600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
25 chr1:165637800-165649200 Weak transcription Aorta Aorta
26 chr1:165637800-165651200 Weak transcription NHEK skin
27 chr1:165637800-165653400 Weak transcription Pancreatic Islets Pancreatic Islet
28 chr1:165638000-165647800 Weak transcription HMEC breast
29 chr1:165638000-165666800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
30 chr1:165638400-165648000 Weak transcription HepG2 liver
31 chr1:165638600-165647800 Weak transcription Brain Anterior Caudate brain
32 chr1:165638600-165647800 Weak transcription K562 blood
33 chr1:165638600-165649000 Weak transcription Psoas Muscle Psoas
34 chr1:165638600-165665400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
35 chr1:165638800-165647600 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
36 chr1:165639200-165659800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
37 chr1:165640000-165652800 Strong transcription Fetal Intestine Large intestine
38 chr1:165640400-165646600 Strong transcription Rectal Mucosa Donor 29 rectum
39 chr1:165640800-165648000 Weak transcription GM12878-XiMat blood
40 chr1:165640800-165649200 Weak transcription Esophagus oesophagus
41 chr1:165641800-165648000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
42 chr1:165641800-165648000 Weak transcription Primary T killer memory cells from peripheral blood blood
43 chr1:165641800-165652200 Strong transcription Primary neutrophils fromperipheralblood blood
44 chr1:165642000-165651200 Weak transcription Fetal Kidney kidney
45 chr1:165642800-165646800 Strong transcription Skeletal Muscle Female skeletal muscle
46 chr1:165643000-165652400 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
47 chr1:165643000-165652600 Strong transcription Fetal Thymus thymus
48 chr1:165643400-165654800 Weak transcription Right Atrium heart
49 chr1:165643800-165647400 Strong transcription Primary mononuclear cells fromperipheralblood Blood
50 chr1:165644000-165646600 Strong transcription Primary T helper cells PMA-I stimulated --

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Last update: Aug 31, 2015