Variant report

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs10094813	0.89[AFR][1000 genomes];0.89[AMR][1000 genomes];0.89[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10096468	0.90[AFR][1000 genomes];0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10098905	0.94[EUR][1000 genomes]
rs10108722	0.92[AFR][1000 genomes];0.91[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10110503	0.92[ASN][1000 genomes]
rs1384680	0.93[ASN][1000 genomes]
rs1483178	0.85[ASN][1000 genomes]
rs1483181	0.88[AFR][1000 genomes];0.89[AMR][1000 genomes];0.89[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1483182	0.89[AFR][1000 genomes];0.89[AMR][1000 genomes];0.89[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1601060	0.88[ASN][1000 genomes]
rs1825308	0.94[ASN][1000 genomes]
rs2351436	0.93[ASN][1000 genomes]
rs2351644	0.86[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4738940	1.00[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6471997	0.96[CEU][hapmap];0.93[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs7002834	0.94[EUR][1000 genomes]
rs900493	0.89[AFR][1000 genomes];0.89[AMR][1000 genomes];0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs2351643	LOC643763	cis	parietal	SCAN

Chromatin state (count:21 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:63075000-63077400	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
2	chr8:63075400-63077400	Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
3	chr8:63075800-63078000	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
4	chr8:63075800-63078000	Enhancers	HUES6 Cell Line	embryonic stem cell
5	chr8:63076000-63077200	Flanking Active TSS	Hela-S3	cervix
6	chr8:63076200-63077200	Enhancers	HUES64 Cell Line	embryonic stem cell
7	chr8:63076200-63077200	Enhancers	iPS-18 Cell Line	embryonic stem cell
8	chr8:63076200-63077400	Enhancers	H1 Cell Line	embryonic stem cell
9	chr8:63076200-63077600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
10	chr8:63076200-63077800	Enhancers	NH-A	brain
11	chr8:63076200-63078000	Enhancers	HUES48 Cell Line	embryonic stem cell
12	chr8:63076200-63078000	Enhancers	iPS-15b Cell Line	embryonic stem cell
13	chr8:63076400-63077400	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
14	chr8:63076400-63077600	Active TSS	Rectal Mucosa Donor 31	rectum
15	chr8:63076400-63078000	Enhancers	ES-I3 Cell Line	embryonic stem cell
16	chr8:63076600-63077000	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
17	chr8:63076600-63077800	Active TSS	Rectal Mucosa Donor 29	rectum
18	chr8:63076600-63078000	Enhancers	HMEC	breast
19	chr8:63076800-63077400	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
20	chr8:63076800-63077600	Active TSS	Stomach Mucosa	stomach
21	chr8:63076800-63077600	Active TSS	A549	lung

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