Variant report

Variant	rs2351644
Chromosome Location	chr8:63077129-63077130
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 15 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:15)

rs_ID	r²[population]
rs10094813	0.93[ASN][1000 genomes]
rs10096468	0.84[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10108722	0.93[ASN][1000 genomes]
rs10110503	0.96[ASN][1000 genomes]
rs1384680	0.95[AFR][1000 genomes];0.92[AMR][1000 genomes];0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1483178	0.81[ASN][1000 genomes]
rs1483181	0.91[ASN][1000 genomes]
rs1483182	0.93[ASN][1000 genomes]
rs1601060	0.91[AFR][1000 genomes];0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs1825308	0.90[AFR][1000 genomes];0.82[AMR][1000 genomes];0.97[ASN][1000 genomes]
rs2351436	0.90[AFR][1000 genomes];0.88[AMR][1000 genomes];0.88[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2351643	0.86[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs4738940	0.85[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs6471997	0.87[CHB][hapmap];1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs900493	0.93[ASN][1000 genomes]

No data

Chromatin state (count:28 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:63075000-63077400	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
2	chr8:63075400-63077400	Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
3	chr8:63075800-63078000	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
4	chr8:63075800-63078000	Enhancers	HUES6 Cell Line	embryonic stem cell
5	chr8:63076000-63077200	Flanking Active TSS	Hela-S3	cervix
6	chr8:63076200-63077200	Enhancers	HUES64 Cell Line	embryonic stem cell
7	chr8:63076200-63077200	Enhancers	iPS-18 Cell Line	embryonic stem cell
8	chr8:63076200-63077400	Enhancers	H1 Cell Line	embryonic stem cell
9	chr8:63076200-63077600	Enhancers	ES-UCSF4 Cell Line	embryonic stem cell
10	chr8:63076200-63077800	Enhancers	NH-A	brain
11	chr8:63076200-63078000	Enhancers	HUES48 Cell Line	embryonic stem cell
12	chr8:63076200-63078000	Enhancers	iPS-15b Cell Line	embryonic stem cell
13	chr8:63076400-63077400	Enhancers	iPS DF 6.9 Cell Line	embryonic stem cell
14	chr8:63076400-63077600	Active TSS	Rectal Mucosa Donor 31	rectum
15	chr8:63076400-63078000	Enhancers	ES-I3 Cell Line	embryonic stem cell
16	chr8:63076600-63077800	Active TSS	Rectal Mucosa Donor 29	rectum
17	chr8:63076600-63078000	Enhancers	HMEC	breast
18	chr8:63076800-63077400	Flanking Active TSS	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
19	chr8:63076800-63077600	Active TSS	Stomach Mucosa	stomach
20	chr8:63076800-63077600	Active TSS	A549	lung
21	chr8:63077000-63077400	Enhancers	Fetal Intestine Small	intestine
22	chr8:63077000-63077400	Active TSS	Rectal Smooth Muscle	rectum
23	chr8:63077000-63077600	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
24	chr8:63077000-63077600	Enhancers	iPS DF 19.11 Cell Line	embryonic stem cell
25	chr8:63077000-63077600	Enhancers	Muscle Satellite Cultured Cells	--
26	chr8:63077000-63077800	Enhancers	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
27	chr8:63077000-63078000	Enhancers	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
28	chr8:63077000-63078000	Enhancers	Fetal Intestine Large	intestine

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