Variant report

Variant	rs2374075
Chromosome Location	chr12:103849731-103849732
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 50 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:50)

rs_ID	r²[population]
rs10161218	0.82[EUR][1000 genomes]
rs10466955	0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10467023	0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10745966	0.95[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10745969	0.97[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10778245	0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs10860995	0.93[EUR][1000 genomes]
rs10861006	0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10861012	1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs10861023	0.93[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs10861024	0.93[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs10861027	0.91[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs11111565	0.94[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs1112754	0.83[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1316751	0.83[AMR][1000 genomes];0.95[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1319091	0.93[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs1320348	0.93[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs2374063	0.89[EUR][1000 genomes]
rs2374067	0.95[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2374076	0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs2374077	0.87[AFR][1000 genomes];0.93[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2888730	0.89[EUR][1000 genomes]
rs2888731	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3953541	0.93[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4015523	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes]
rs4015525	0.90[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs4015527	0.93[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4015536	0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs4433658	0.89[EUR][1000 genomes]
rs4488299	0.90[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs4506750	0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4764960	0.92[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6539076	1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7295666	0.91[EUR][1000 genomes]
rs7295986	0.89[EUR][1000 genomes]
rs7296215	0.89[EUR][1000 genomes]
rs7299547	0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7301105	0.83[EUR][1000 genomes]
rs7302598	0.95[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7307779	0.89[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs7308343	0.91[EUR][1000 genomes]
rs7312427	0.98[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7316757	0.95[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7958520	0.83[AMR][1000 genomes];0.99[EUR][1000 genomes]
rs7959115	0.91[EUR][1000 genomes]
rs7960043	0.93[EUR][1000 genomes]
rs7964462	0.81[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7965797	0.82[EUR][1000 genomes]
rs7969700	0.96[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7977907	0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]

No data

Chromatin state (count:20 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:103847600-103851400	Enhancers	Primary T helper memory cells from peripheral blood 1	blood
2	chr12:103847800-103850600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
3	chr12:103848000-103851400	Enhancers	Primary T helper naive cells fromperipheralblood	blood
4	chr12:103848200-103850600	Enhancers	Primary T helper naive cells from peripheral blood	blood
5	chr12:103848200-103851800	Enhancers	Primary B cells from peripheral blood	blood
6	chr12:103848400-103850600	Enhancers	Primary T killer naive cells fromperipheralblood	blood
7	chr12:103848400-103851400	Enhancers	GM12878-XiMat	blood
8	chr12:103848400-103851600	Enhancers	Primary T helper cells fromperipheralblood	blood
9	chr12:103848400-103851800	Enhancers	Primary B cells from cord blood	blood
10	chr12:103848400-103851800	Enhancers	Primary T helper memory cells from peripheral blood 2	blood
11	chr12:103848400-103853200	Enhancers	Dnd41	blood
12	chr12:103848600-103850800	Enhancers	Primary T killer memory cells from peripheral blood	blood
13	chr12:103848600-103851400	Enhancers	Primary T regulatory cells fromperipheralblood	blood
14	chr12:103848600-103851800	Enhancers	Primary T helper cells PMA-I stimulated	--
15	chr12:103848600-103852200	Enhancers	Primary T cells from cord blood	blood
16	chr12:103848800-103849800	Enhancers	Primary T helper 17 cells PMA-I stimulated	--
17	chr12:103849000-103850200	Enhancers	Primary T cells fromperipheralblood	blood
18	chr12:103849000-103850400	Enhancers	Thymus	Thymus
19	chr12:103849400-103852400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
20	chr12:103849600-103850600	Enhancers	HUES64 Cell Line	embryonic stem cell

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