Variant report

Variant	rs2422067
Chromosome Location	chr10:94565784-94565785
allele	G/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 12 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:12)

rs_ID	r²[population]
rs11187167	0.83[GIH][hapmap]
rs12241566	0.84[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12249224	0.84[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12779990	0.85[CHD][hapmap];0.83[GIH][hapmap]
rs12780621	0.83[GIH][hapmap]
rs17448243	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34566437	0.83[EUR][1000 genomes]
rs4933239	0.82[AMR][1000 genomes];0.81[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs67412949	0.83[EUR][1000 genomes]
rs71480841	0.96[EUR][1000 genomes]
rs7896131	0.83[EUR][1000 genomes]
rs882136	0.85[JPT][hapmap]

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:94560200-94569600	Weak transcription	Gastric	stomach
2	chr10:94565600-94566000	Enhancers	HUES6 Cell Line	embryonic stem cell

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links