Variant report
| Variant | rs71480841 |
|---|---|
| Chromosome Location | chr10:94567166-94567167 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
(count:1 , 50 per page) page:
1
| No. | Distal block | Cell Line | Cell type | Cell Stage |
|---|---|---|---|---|
| 1 | chr10:94565781..94567903-chr10:94568730..94570614,2 | K562 | blood: |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:45)
| rs_ID | r2[population] |
|---|---|
| rs11187161 | 1.00[ASN][1000 genomes] |
| rs11187162 | 1.00[ASN][1000 genomes] |
| rs11187164 | 1.00[ASN][1000 genomes] |
| rs11187166 | 1.00[ASN][1000 genomes] |
| rs11187167 | 1.00[ASN][1000 genomes] |
| rs11187169 | 1.00[ASN][1000 genomes] |
| rs11187170 | 1.00[ASN][1000 genomes] |
| rs11187173 | 1.00[ASN][1000 genomes] |
| rs11187179 | 1.00[ASN][1000 genomes] |
| rs12241566 | 0.96[EUR][1000 genomes] |
| rs12249224 | 0.96[EUR][1000 genomes] |
| rs12261163 | 0.84[ASN][1000 genomes] |
| rs12355562 | 1.00[ASN][1000 genomes] |
| rs12358931 | 1.00[ASN][1000 genomes] |
| rs12763565 | 1.00[ASN][1000 genomes] |
| rs12763786 | 1.00[ASN][1000 genomes] |
| rs12764758 | 1.00[ASN][1000 genomes] |
| rs12765131 | 1.00[ASN][1000 genomes] |
| rs12766137 | 0.92[ASN][1000 genomes] |
| rs12779884 | 1.00[ASN][1000 genomes] |
| rs12779990 | 1.00[ASN][1000 genomes] |
| rs12780621 | 1.00[ASN][1000 genomes] |
| rs12784232 | 1.00[ASN][1000 genomes] |
| rs17448243 | 0.96[EUR][1000 genomes] |
| rs2422067 | 0.96[EUR][1000 genomes] |
| rs2488056 | 1.00[ASN][1000 genomes] |
| rs2488066 | 0.92[ASN][1000 genomes] |
| rs2497351 | 1.00[ASN][1000 genomes] |
| rs34269987 | 1.00[ASN][1000 genomes] |
| rs34478558 | 1.00[ASN][1000 genomes] |
| rs34566437 | 0.85[AFR][1000 genomes];0.95[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs34636435 | 1.00[ASN][1000 genomes] |
| rs34664889 | 1.00[ASN][1000 genomes] |
| rs35001517 | 1.00[ASN][1000 genomes] |
| rs35039517 | 0.92[ASN][1000 genomes] |
| rs35235479 | 1.00[ASN][1000 genomes] |
| rs36016244 | 1.00[ASN][1000 genomes] |
| rs36082564 | 1.00[ASN][1000 genomes] |
| rs55851824 | 1.00[ASN][1000 genomes] |
| rs55951294 | 1.00[ASN][1000 genomes] |
| rs56026908 | 1.00[ASN][1000 genomes] |
| rs61862826 | 1.00[ASN][1000 genomes] |
| rs6583840 | 1.00[ASN][1000 genomes] |
| rs67412949 | 0.85[AFR][1000 genomes];0.95[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| rs7896131 | 0.87[AMR][1000 genomes];0.85[EUR][1000 genomes];1.00[ASN][1000 genomes] |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr10:94560200-94569600 | Weak transcription | Gastric | stomach |
| 2 | chr10:94566200-94571800 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
