Variant report

Variant	rs34636435
Chromosome Location	chr10:94513980-94513981
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr10:94513316..94515938-chr10:94534466..94536258,2	K562	blood:
2	chr10:94454513..94457218-chr10:94513369..94516034,3	K562	blood:
3	chr10:94331646..94333667-chr10:94512127..94514610,2	K562	blood:
4	chr10:94511052..94514419-chr10:94514793..94517097,3	K562	blood:

Extended variants
information (count: 43 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:42)

rs_ID	r²[population]
rs11187161	0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11187162	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11187164	0.90[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11187166	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11187167	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11187169	0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11187170	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11187173	1.00[ASN][1000 genomes]
rs11187179	1.00[ASN][1000 genomes]
rs12261163	0.84[ASN][1000 genomes]
rs12355562	1.00[ASN][1000 genomes]
rs12358931	1.00[ASN][1000 genomes]
rs12763565	0.81[AFR][1000 genomes];0.81[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12763786	0.81[AMR][1000 genomes];0.93[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12764758	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12765131	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12766137	0.85[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs12779884	1.00[ASN][1000 genomes]
rs12779990	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12780621	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12784232	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2488056	1.00[ASN][1000 genomes]
rs2488066	0.92[ASN][1000 genomes]
rs2497351	1.00[ASN][1000 genomes]
rs34269987	0.94[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs34478558	1.00[ASN][1000 genomes]
rs34566437	1.00[ASN][1000 genomes]
rs34664889	0.81[AFR][1000 genomes];0.81[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35001517	0.81[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs35039517	0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs35235479	0.81[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs36016244	1.00[ASN][1000 genomes]
rs36082564	0.94[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4565815	0.91[EUR][1000 genomes]
rs55851824	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55951294	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56026908	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs61862826	0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6583840	1.00[ASN][1000 genomes]
rs67412949	1.00[ASN][1000 genomes]
rs71480841	1.00[ASN][1000 genomes]
rs7896131	1.00[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3446249	chr10:94374508-94549394	Strong transcription Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Flanking Active TSS Active TSS Weak transcription Enhancers Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	17 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:22 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:94511200-94515600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
2	chr10:94511200-94515600	Weak transcription	Hela-S3	cervix
3	chr10:94511200-94516400	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
4	chr10:94511400-94516200	Weak transcription	Osteobl	bone
5	chr10:94511400-94516400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
6	chr10:94511600-94515600	Weak transcription	Adipose Nuclei	Adipose
7	chr10:94511600-94515600	Weak transcription	Colon Smooth Muscle	Colon
8	chr10:94511600-94515800	Weak transcription	A549	lung
9	chr10:94511800-94514800	Weak transcription	HepG2	liver
10	chr10:94512200-94516600	Enhancers	Primary B cells from peripheral blood	blood
11	chr10:94513000-94515600	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
12	chr10:94513000-94515600	Enhancers	K562	blood
13	chr10:94513000-94516000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
14	chr10:94513200-94515600	Enhancers	Primary hematopoietic stem cells	blood
15	chr10:94513200-94515600	Enhancers	Monocytes-CD14+_RO01746	blood
16	chr10:94513200-94515800	Enhancers	Primary B cells from cord blood	blood
17	chr10:94513400-94517200	Enhancers	Primary monocytes fromperipheralblood	blood
18	chr10:94513600-94514000	Enhancers	Breast Myoepithelial Primary Cells	Breast
19	chr10:94513600-94514400	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
20	chr10:94513600-94515600	Enhancers	Primary neutrophils fromperipheralblood	blood
21	chr10:94513800-94514000	Enhancers	HUVEC	blood vessel
22	chr10:94513800-94515600	Enhancers	Primary hematopoietic stem cells short term culture	blood

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