Variant report

Variant rs2472393
Chromosome Location chrX:153771296-153771297
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:119 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chrX:153756000-153774200 Weak transcription Psoas Muscle Psoas
2 chrX:153756000-153774800 Weak transcription Aorta Aorta
3 chrX:153762800-153774200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
4 chrX:153762800-153774800 Weak transcription Sigmoid Colon Sigmoid Colon
5 chrX:153763000-153774400 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
6 chrX:153763000-153774400 Weak transcription Fetal Kidney kidney
7 chrX:153763600-153773000 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
8 chrX:153763600-153774400 Weak transcription Fetal Intestine Large intestine
9 chrX:153764200-153774600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
10 chrX:153764400-153774200 Weak transcription Pancreas Pancrea
11 chrX:153764600-153774000 Weak transcription Brain Germinal Matrix brain
12 chrX:153767800-153771600 Weak transcription Brain Anterior Caudate brain
13 chrX:153768600-153771800 ZNF genes & repeats Fetal Stomach stomach
14 chrX:153768800-153771800 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
15 chrX:153768800-153771800 Enhancers Skeletal Muscle Female skeletal muscle
16 chrX:153768800-153771800 Enhancers Stomach Mucosa stomach
17 chrX:153768800-153772000 ZNF genes & repeats H9 Cell Line embryonic stem cell
18 chrX:153768800-153772200 Strong transcription H1 Cell Line embryonic stem cell
19 chrX:153769000-153771400 Genic enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
20 chrX:153769000-153771400 Enhancers Primary T killer naive cells fromperipheralblood blood
21 chrX:153769000-153771600 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
22 chrX:153769000-153771800 ZNF genes & repeats ES-UCSF4 Cell Line embryonic stem cell
23 chrX:153769000-153771800 Enhancers Brain Substantia Nigra brain
24 chrX:153769000-153771800 Enhancers Esophagus oesophagus
25 chrX:153769000-153772000 ZNF genes & repeats Fetal Brain Female brain
26 chrX:153769000-153772000 Flanking Active TSS Hela-S3 cervix
27 chrX:153769000-153772000 Enhancers HUVEC blood vessel
28 chrX:153769000-153773600 Strong transcription Fetal Intestine Small intestine
29 chrX:153769000-153774200 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chrX:153769000-153774200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
31 chrX:153769000-153774200 Strong transcription HUES64 Cell Line embryonic stem cell
32 chrX:153769200-153773200 Flanking Active TSS Primary neutrophils fromperipheralblood blood
33 chrX:153769200-153773800 Enhancers Primary hematopoietic stem cells blood
34 chrX:153769400-153771400 Bivalent Enhancer Placenta Placenta
35 chrX:153769400-153771400 Enhancers Ovary ovary
36 chrX:153769400-153771800 Enhancers Right Atrium heart
37 chrX:153769400-153771800 Transcr. at gene 5' and 3' K562 blood
38 chrX:153769400-153771800 Genic enhancers NHLF lung
39 chrX:153769600-153771800 Enhancers Lung lung
40 chrX:153769600-153772000 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
41 chrX:153769600-153772000 Genic enhancers Fetal Adrenal Gland Adrenal Gland
42 chrX:153769800-153771400 Genic enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
43 chrX:153769800-153771800 Enhancers ES-I3 Cell Line embryonic stem cell
44 chrX:153769800-153771800 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
45 chrX:153769800-153771800 Enhancers Brain Hippocampus Middle brain
46 chrX:153769800-153772000 Enhancers Primary T helper 17 cells PMA-I stimulated --
47 chrX:153769800-153772800 Weak transcription iPS-15b Cell Line embryonic stem cell
48 chrX:153770000-153771400 Genic enhancers Cortex derived primary cultured neurospheres brain
49 chrX:153770000-153771400 Enhancers Brain Angular Gyrus brain
50 chrX:153770000-153771600 Flanking Active TSS Skeletal Muscle Male skeletal muscle

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