The 2.0 version of rSNPBase

Variant report

Variant rs2473901
Chromosome Location chr11:34216881-34216882
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:78 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr11:34203000-34224800 Weak transcription Primary neutrophils fromperipheralblood blood
2 chr11:34203400-34228200 Weak transcription Psoas Muscle Psoas
3 chr11:34207000-34218000 Weak transcription Primary hematopoietic stem cells short term culture blood
4 chr11:34207200-34226000 Weak transcription Gastric stomach
5 chr11:34208200-34235200 Weak transcription Adipose Nuclei Adipose
6 chr11:34208400-34217200 Weak transcription Left Ventricle heart
7 chr11:34210600-34224800 Weak transcription Primary T cells from cord blood blood
8 chr11:34210600-34226600 Weak transcription Pancreas Pancrea
9 chr11:34211200-34217000 Weak transcription Liver Liver
10 chr11:34214000-34217000 Enhancers ES-I3 Cell Line embryonic stem cell
11 chr11:34214000-34217200 Enhancers HUES6 Cell Line embryonic stem cell
12 chr11:34214000-34224400 Weak transcription GM12878-XiMat blood
13 chr11:34214200-34217200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
14 chr11:34214600-34217000 Enhancers HUES48 Cell Line embryonic stem cell
15 chr11:34214600-34217200 Enhancers iPS-18 Cell Line embryonic stem cell
16 chr11:34214600-34228000 Weak transcription Brain Angular Gyrus brain
17 chr11:34214800-34217200 Enhancers NH-A brain
18 chr11:34214800-34225200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
19 chr11:34215000-34217000 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
20 chr11:34215000-34217400 Weak transcription Fetal Intestine Small intestine
21 chr11:34215000-34218800 Weak transcription Fetal Thymus thymus
22 chr11:34215000-34219400 Weak transcription Duodenum Smooth Muscle Duodenum
23 chr11:34215000-34223200 Weak transcription Fetal Lung lung
24 chr11:34215000-34228200 Weak transcription Brain Inferior Temporal Lobe brain
25 chr11:34215000-34228400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
26 chr11:34215000-34235800 Weak transcription Brain Anterior Caudate brain
27 chr11:34215200-34220000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
28 chr11:34215200-34226400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
29 chr11:34215200-34226400 Weak transcription Osteobl bone
30 chr11:34215200-34227400 Weak transcription Brain Substantia Nigra brain
31 chr11:34215200-34228200 Weak transcription Duodenum Mucosa Duodenum
32 chr11:34215400-34217200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
33 chr11:34215400-34217200 Weak transcription Fetal Stomach stomach
34 chr11:34215400-34217600 Enhancers Aorta Aorta
35 chr11:34215400-34218800 Weak transcription Esophagus oesophagus
36 chr11:34215600-34217000 Enhancers iPS-15b Cell Line embryonic stem cell
37 chr11:34215600-34217000 Weak transcription HSMMtube muscle
38 chr11:34215600-34217200 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
39 chr11:34215600-34217600 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
40 chr11:34215600-34218800 Weak transcription Breast Myoepithelial Primary Cells Breast
41 chr11:34215600-34224400 Weak transcription NHEK skin
42 chr11:34215600-34225400 Weak transcription HUES64 Cell Line embryonic stem cell
43 chr11:34215600-34228200 Weak transcription Right Atrium heart
44 chr11:34215600-34232600 Weak transcription Fetal Brain Female brain
45 chr11:34215800-34217000 Bivalent Enhancer Cortex derived primary cultured neurospheres brain
46 chr11:34215800-34217000 Weak transcription A549 lung
47 chr11:34215800-34217200 Enhancers ES-WA7 Cell Line embryonic stem cell
48 chr11:34215800-34219000 Weak transcription NHDF-Ad bronchial
49 chr11:34215800-34224800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
50 chr11:34215800-34225400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin

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Last update: Aug 31, 2015