Variant report

Variant rs2500423
Chromosome Location chr20:25374882-25374883
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:24 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:25372000-25378000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
2 chr20:25372000-25379000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr20:25372200-25377600 Weak transcription Duodenum Mucosa Duodenum
4 chr20:25372200-25377600 Weak transcription Rectal Mucosa Donor 31 rectum
5 chr20:25372200-25379000 Weak transcription Brain Angular Gyrus brain
6 chr20:25372200-25379000 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
7 chr20:25372200-25380800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
8 chr20:25372400-25375000 Weak transcription GM12878-XiMat blood
9 chr20:25372400-25377800 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
10 chr20:25372400-25379000 Weak transcription Breast Myoepithelial Primary Cells Breast
11 chr20:25372400-25379200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
12 chr20:25374000-25376000 Enhancers Fetal Thymus thymus
13 chr20:25374200-25375400 Enhancers Brain Anterior Caudate brain
14 chr20:25374200-25375800 Bivalent Enhancer HepG2 liver
15 chr20:25374200-25376000 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
16 chr20:25374400-25375000 Enhancers Brain Cingulate Gyrus brain
17 chr20:25374400-25375200 Enhancers Brain Hippocampus Middle brain
18 chr20:25374400-25375400 Enhancers Thymus Thymus
19 chr20:25374400-25375800 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
20 chr20:25374600-25375000 Enhancers Brain Inferior Temporal Lobe brain
21 chr20:25374600-25375200 Enhancers Brain Substantia Nigra brain
22 chr20:25374600-25375400 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
23 chr20:25374800-25375200 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
24 chr20:25374800-25379400 Weak transcription Hela-S3 cervix

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