Variant report

Variant rs2500443
Chromosome Location chr20:25331442-25331443
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:52 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:25292600-25351600 Weak transcription NHDF-Ad bronchial
2 chr20:25305000-25331800 Weak transcription Duodenum Smooth Muscle Duodenum
3 chr20:25305400-25335000 Weak transcription Primary B cells from cord blood blood
4 chr20:25306200-25335800 Weak transcription Fetal Adrenal Gland Adrenal Gland
5 chr20:25309600-25333200 Weak transcription NHLF lung
6 chr20:25310200-25332000 Weak transcription Colon Smooth Muscle Colon
7 chr20:25310400-25334400 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
8 chr20:25310600-25334200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
9 chr20:25317600-25335600 Weak transcription Small Intestine intestine
10 chr20:25319200-25334200 Weak transcription Right Ventricle heart
11 chr20:25319200-25348400 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
12 chr20:25319400-25337000 Weak transcription Fetal Muscle Trunk muscle
13 chr20:25319600-25334600 Weak transcription Fetal Brain Female brain
14 chr20:25319600-25337000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
15 chr20:25319800-25334400 Weak transcription Fetal Kidney kidney
16 chr20:25320000-25336800 Weak transcription Primary T regulatory cells fromperipheralblood blood
17 chr20:25321200-25331800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
18 chr20:25321200-25334200 Weak transcription Ovary ovary
19 chr20:25321400-25331800 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
20 chr20:25322200-25334200 Weak transcription Sigmoid Colon Sigmoid Colon
21 chr20:25322400-25336600 Weak transcription Fetal Heart heart
22 chr20:25323400-25333400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
23 chr20:25323600-25333000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
24 chr20:25323600-25333200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
25 chr20:25324200-25333400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
26 chr20:25324200-25337200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
27 chr20:25324400-25334200 Weak transcription Left Ventricle heart
28 chr20:25325400-25334200 Weak transcription Primary hematopoietic stem cells short term culture blood
29 chr20:25325400-25334200 Weak transcription GM12878-XiMat blood
30 chr20:25325400-25336600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
31 chr20:25325600-25333600 Weak transcription Brain Cingulate Gyrus brain
32 chr20:25325600-25334200 Weak transcription A549 lung
33 chr20:25325600-25336600 Weak transcription Dnd41 blood
34 chr20:25327400-25361400 Weak transcription Primary T cells from cord blood blood
35 chr20:25327800-25335600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
36 chr20:25328000-25337000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
37 chr20:25330400-25334400 Weak transcription Aorta Aorta
38 chr20:25331000-25331600 Enhancers Pancreas Pancrea
39 chr20:25331000-25332000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
40 chr20:25331000-25332000 Enhancers Fetal Intestine Large intestine
41 chr20:25331000-25332200 Enhancers Fetal Intestine Small intestine
42 chr20:25331200-25332200 Enhancers Rectal Mucosa Donor 29 rectum
43 chr20:25331200-25332200 Enhancers K562 blood
44 chr20:25331400-25332000 Enhancers Brain Angular Gyrus brain
45 chr20:25331400-25332200 Enhancers HUES64 Cell Line embryonic stem cell
46 chr20:25331400-25332200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
47 chr20:25331400-25332200 Enhancers Cortex derived primary cultured neurospheres brain
48 chr20:25331400-25332200 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
49 chr20:25331400-25332200 Enhancers Brain Hippocampus Middle brain
50 chr20:25331400-25332200 Enhancers Brain Substantia Nigra brain

Quick Search:


  
Input of quick search could be:

what's new

Quick links