Variant report

Variant rs6050482
Chromosome Location chr20:25226327-25226328
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:47 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:25217600-25227600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
2 chr20:25219000-25227400 Weak transcription Colon Smooth Muscle Colon
3 chr20:25219400-25226800 Weak transcription Rectal Mucosa Donor 29 rectum
4 chr20:25219400-25226800 Weak transcription Right Ventricle heart
5 chr20:25219400-25227600 Weak transcription Brain Inferior Temporal Lobe brain
6 chr20:25219400-25228000 Weak transcription ES-WA7 Cell Line embryonic stem cell
7 chr20:25219600-25227000 Weak transcription NHDF-Ad bronchial
8 chr20:25219800-25227400 Weak transcription NHLF lung
9 chr20:25220200-25227000 Weak transcription Breast Myoepithelial Primary Cells Breast
10 chr20:25220400-25227400 Weak transcription Esophagus oesophagus
11 chr20:25220600-25226800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
12 chr20:25220600-25227200 Weak transcription Placenta Amnion Placenta Amnion
13 chr20:25221800-25226800 Weak transcription Muscle Satellite Cultured Cells --
14 chr20:25221800-25226800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
15 chr20:25222000-25226800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
16 chr20:25222000-25227000 Weak transcription HSMM muscle
17 chr20:25222000-25227200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
18 chr20:25222000-25227400 Weak transcription Fetal Kidney kidney
19 chr20:25222000-25227400 Weak transcription HSMMtube muscle
20 chr20:25222000-25227600 Weak transcription Fetal Lung lung
21 chr20:25222400-25227000 Weak transcription K562 blood
22 chr20:25222400-25227400 Weak transcription NH-A brain
23 chr20:25223200-25227400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
24 chr20:25223400-25227400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
25 chr20:25223600-25227800 Weak transcription Brain Germinal Matrix brain
26 chr20:25223800-25227600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
27 chr20:25225800-25226800 Enhancers A549 lung
28 chr20:25225800-25226800 Enhancers HMEC breast
29 chr20:25225800-25227000 Enhancers Rectal Mucosa Donor 31 rectum
30 chr20:25226000-25226400 Enhancers HUES6 Cell Line embryonic stem cell
31 chr20:25226000-25226800 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
32 chr20:25226000-25226800 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
33 chr20:25226000-25226800 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
34 chr20:25226000-25227000 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
35 chr20:25226000-25227000 Enhancers NHEK skin
36 chr20:25226000-25227200 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
37 chr20:25226000-25227200 Enhancers Fetal Heart heart
38 chr20:25226000-25227400 Enhancers Hela-S3 cervix
39 chr20:25226200-25226400 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
40 chr20:25226200-25226600 Enhancers HUES48 Cell Line embryonic stem cell
41 chr20:25226200-25227000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
42 chr20:25226200-25227000 Enhancers iPS-20b Cell Line embryonic stem cell
43 chr20:25226200-25227000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
44 chr20:25226200-25227200 Weak transcription Colonic Mucosa Colon
45 chr20:25226200-25227600 Enhancers Fetal Intestine Large intestine
46 chr20:25226200-25227600 Weak transcription Sigmoid Colon Sigmoid Colon
47 chr20:25226200-25227600 Enhancers GM12878-XiMat blood

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