Variant report

Variant rs6132822
Chromosome Location chr20:25228695-25228696
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:127 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:25227600-25229600 Active TSS Primary T killer memory cells from peripheral blood blood
2 chr20:25227600-25229800 Active TSS iPS DF 6.9 Cell Line embryonic stem cell
3 chr20:25227600-25229800 Active TSS Duodenum Smooth Muscle Duodenum
4 chr20:25227600-25230000 Active TSS Fetal Brain Female brain
5 chr20:25227600-25230200 Active TSS H9 Cell Line embryonic stem cell
6 chr20:25227600-25231200 Active TSS Sigmoid Colon Sigmoid Colon
7 chr20:25227800-25228800 Weak transcription Fetal Heart heart
8 chr20:25227800-25229200 Flanking Active TSS Skeletal Muscle Female skeletal muscle
9 chr20:25227800-25229600 Active TSS Fetal Intestine Small intestine
10 chr20:25227800-25229600 Active TSS Fetal Kidney kidney
11 chr20:25227800-25229800 Active TSS Pancreatic Islets Pancreatic Islet
12 chr20:25227800-25229800 Active TSS Small Intestine intestine
13 chr20:25227800-25230000 Active TSS A549 lung
14 chr20:25227800-25230200 Flanking Active TSS Primary hematopoietic stem cells blood
15 chr20:25227800-25230800 Active TSS ES-I3 Cell Line embryonic stem cell
16 chr20:25227800-25230800 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
17 chr20:25227800-25231000 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
18 chr20:25227800-25231200 Active TSS Left Ventricle heart
19 chr20:25227800-25231600 Active TSS Right Atrium heart
20 chr20:25228000-25228800 Active TSS Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr20:25228000-25229000 Active TSS Gastric stomach
22 chr20:25228000-25229200 Transcr. at gene 5' and 3' iPS DF 19.11 Cell Line embryonic stem cell
23 chr20:25228000-25229400 Active TSS Primary T helper memory cells from peripheral blood 2 blood
24 chr20:25228000-25229400 Active TSS Rectal Mucosa Donor 31 rectum
25 chr20:25228000-25229600 Active TSS Hela-S3 cervix
26 chr20:25228000-25229800 Active TSS H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
27 chr20:25228000-25229800 Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
28 chr20:25228000-25229800 Active TSS Ovary ovary
29 chr20:25228000-25230000 Active TSS iPS-18 Cell Line embryonic stem cell
30 chr20:25228000-25230000 Active TSS Rectal Mucosa Donor 29 rectum
31 chr20:25228000-25230000 Active TSS NHDF-Ad bronchial
32 chr20:25228000-25230200 Active TSS ES-WA7 Cell Line embryonic stem cell
33 chr20:25228000-25230200 Active TSS Psoas Muscle Psoas
34 chr20:25228000-25230200 Active TSS Stomach Mucosa stomach
35 chr20:25228000-25230600 Active TSS NHEK skin
36 chr20:25228000-25230800 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
37 chr20:25228000-25230800 Active TSS Aorta Aorta
38 chr20:25228000-25230800 Active TSS Rectal Smooth Muscle rectum
39 chr20:25228000-25230800 Active TSS HMEC breast
40 chr20:25228000-25230800 Active TSS HSMM muscle
41 chr20:25228200-25229200 Active TSS Primary T regulatory cells fromperipheralblood blood
42 chr20:25228200-25229200 Active TSS Monocytes-CD14+_RO01746 blood
43 chr20:25228200-25229400 Active TSS Primary T cells from cord blood blood
44 chr20:25228200-25229400 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
45 chr20:25228200-25229400 Active TSS Skeletal Muscle Male skeletal muscle
46 chr20:25228200-25229400 Active TSS Spleen Spleen
47 chr20:25228200-25229400 Active TSS K562 blood
48 chr20:25228200-25229600 Active TSS HUES48 Cell Line embryonic stem cell
49 chr20:25228200-25229600 Active TSS Primary T helper naive cells from peripheral blood blood
50 chr20:25228200-25229600 Transcr. at gene 5' and 3' Primary T helper 17 cells PMA-I stimulated --

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