Variant report

Variant rs6132824
Chromosome Location chr20:25238173-25238174
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:121 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:25229800-25250000 Weak transcription Placenta Amnion Placenta Amnion
2 chr20:25230200-25239000 Weak transcription Primary B cells from cord blood blood
3 chr20:25230200-25239600 Enhancers Stomach Mucosa stomach
4 chr20:25230200-25239800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
5 chr20:25230200-25240400 Weak transcription H9 Cell Line embryonic stem cell
6 chr20:25230200-25240400 Weak transcription Primary neutrophils fromperipheralblood blood
7 chr20:25230400-25239800 Weak transcription HUES64 Cell Line embryonic stem cell
8 chr20:25230400-25239800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
9 chr20:25230400-25291600 Weak transcription Pancreatic Islets Pancreatic Islet
10 chr20:25230600-25239800 Weak transcription Fetal Lung lung
11 chr20:25231000-25239400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
12 chr20:25231000-25239800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
13 chr20:25231000-25240400 Weak transcription iPS-18 Cell Line embryonic stem cell
14 chr20:25231200-25239200 Weak transcription Primary T helper naive cells from peripheral blood blood
15 chr20:25231200-25251800 Weak transcription Hela-S3 cervix
16 chr20:25231200-25252200 Weak transcription HUVEC blood vessel
17 chr20:25231400-25240000 Weak transcription H1 Cell Line embryonic stem cell
18 chr20:25231400-25240800 Weak transcription HUES48 Cell Line embryonic stem cell
19 chr20:25231400-25249800 Weak transcription Small Intestine intestine
20 chr20:25232000-25239400 Weak transcription Primary hematopoietic stem cells blood
21 chr20:25232000-25239400 Weak transcription Primary T killer memory cells from peripheral blood blood
22 chr20:25232200-25238200 Weak transcription Primary T regulatory cells fromperipheralblood blood
23 chr20:25232600-25238600 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
24 chr20:25232600-25240000 Weak transcription Thymus Thymus
25 chr20:25233200-25238400 Weak transcription K562 blood
26 chr20:25233200-25239200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
27 chr20:25233200-25239400 Enhancers Primary T cells from cord blood blood
28 chr20:25233200-25252200 Weak transcription Fetal Brain Male brain
29 chr20:25234000-25239200 Weak transcription Primary hematopoietic stem cells short term culture blood
30 chr20:25234000-25239200 Weak transcription Spleen Spleen
31 chr20:25234000-25240000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
32 chr20:25234000-25240200 Weak transcription HSMM muscle
33 chr20:25234400-25238200 Enhancers Brain Substantia Nigra brain
34 chr20:25234600-25238400 Enhancers Adipose Nuclei Adipose
35 chr20:25234600-25242400 Weak transcription ES-I3 Cell Line embryonic stem cell
36 chr20:25235000-25238200 Genic enhancers HMEC breast
37 chr20:25235000-25239600 Genic enhancers Breast Myoepithelial Primary Cells Breast
38 chr20:25235000-25243000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
39 chr20:25235200-25238200 Strong transcription Fetal Intestine Small intestine
40 chr20:25235600-25239800 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
41 chr20:25235600-25291200 Weak transcription Fetal Kidney kidney
42 chr20:25235800-25240000 Weak transcription Fetal Brain Female brain
43 chr20:25236000-25238600 Enhancers Brain Anterior Caudate brain
44 chr20:25236000-25238800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
45 chr20:25236000-25239200 Strong transcription Fetal Stomach stomach
46 chr20:25236000-25239800 Weak transcription NH-A brain
47 chr20:25236000-25242200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
48 chr20:25236200-25238400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
49 chr20:25236200-25238600 Weak transcription Primary T killer naive cells fromperipheralblood blood
50 chr20:25236200-25238600 Enhancers Fetal Heart heart

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