Variant report

Variant rs6107019
Chromosome Location chr20:25233985-25233986
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:25229800-25235400 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr20:25229800-25250000 Weak transcription Placenta Amnion Placenta Amnion
3 chr20:25230200-25234000 Enhancers Primary T killer naive cells fromperipheralblood blood
4 chr20:25230200-25235400 Weak transcription Primary B cells from peripheral blood blood
5 chr20:25230200-25235800 Weak transcription ES-WA7 Cell Line embryonic stem cell
6 chr20:25230200-25236000 Weak transcription Psoas Muscle Psoas
7 chr20:25230200-25237400 Weak transcription Fetal Thymus thymus
8 chr20:25230200-25239000 Weak transcription Primary B cells from cord blood blood
9 chr20:25230200-25239600 Enhancers Stomach Mucosa stomach
10 chr20:25230200-25239800 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
11 chr20:25230200-25240400 Weak transcription H9 Cell Line embryonic stem cell
12 chr20:25230200-25240400 Weak transcription Primary neutrophils fromperipheralblood blood
13 chr20:25230400-25239800 Weak transcription HUES64 Cell Line embryonic stem cell
14 chr20:25230400-25239800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
15 chr20:25230400-25291600 Weak transcription Pancreatic Islets Pancreatic Islet
16 chr20:25230600-25239800 Weak transcription Fetal Lung lung
17 chr20:25230800-25234000 Genic enhancers IMR90 fetal lung fibroblasts Cell Line lung
18 chr20:25230800-25234000 Enhancers Pancreas Pancrea
19 chr20:25230800-25235600 Weak transcription Primary monocytes fromperipheralblood blood
20 chr20:25231000-25234200 Enhancers Adipose Nuclei Adipose
21 chr20:25231000-25235600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
22 chr20:25231000-25239400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
23 chr20:25231000-25239800 Weak transcription Primary T helper 17 cells PMA-I stimulated --
24 chr20:25231000-25240400 Weak transcription iPS-18 Cell Line embryonic stem cell
25 chr20:25231200-25237200 Weak transcription Ovary ovary
26 chr20:25231200-25239200 Weak transcription Primary T helper naive cells from peripheral blood blood
27 chr20:25231200-25251800 Weak transcription Hela-S3 cervix
28 chr20:25231200-25252200 Weak transcription HUVEC blood vessel
29 chr20:25231400-25234000 Genic enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
30 chr20:25231400-25234000 Enhancers Brain Dorsolateral Prefrontal Cortex brain
31 chr20:25231400-25234000 Genic enhancers Dnd41 blood
32 chr20:25231400-25234200 Genic enhancers A549 lung
33 chr20:25231400-25235000 Weak transcription Fetal Kidney kidney
34 chr20:25231400-25235200 Weak transcription iPS-15b Cell Line embryonic stem cell
35 chr20:25231400-25235800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
36 chr20:25231400-25236400 Enhancers Brain Hippocampus Middle brain
37 chr20:25231400-25240000 Weak transcription H1 Cell Line embryonic stem cell
38 chr20:25231400-25240800 Weak transcription HUES48 Cell Line embryonic stem cell
39 chr20:25231400-25249800 Weak transcription Small Intestine intestine
40 chr20:25231600-25234000 Enhancers Right Atrium heart
41 chr20:25231800-25234200 Genic enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
42 chr20:25231800-25234200 Genic enhancers Breast Myoepithelial Primary Cells Breast
43 chr20:25231800-25234200 Genic enhancers Lung lung
44 chr20:25231800-25234200 Enhancers Sigmoid Colon Sigmoid Colon
45 chr20:25231800-25237200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
46 chr20:25231800-25237200 Weak transcription NHDF-Ad bronchial
47 chr20:25232000-25234000 Genic enhancers NH-A brain
48 chr20:25232000-25235800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
49 chr20:25232000-25237400 Weak transcription Primary T cells fromperipheralblood blood
50 chr20:25232000-25239400 Weak transcription Primary hematopoietic stem cells blood

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