Variant report

Variant rs4815417
Chromosome Location chr20:25379526-25379527
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:43 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:25372200-25380800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
2 chr20:25375400-25379600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
3 chr20:25377600-25379800 Enhancers GM12878-XiMat blood
4 chr20:25377600-25381600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
5 chr20:25377800-25380000 Enhancers Fetal Intestine Large intestine
6 chr20:25377800-25380000 Enhancers Placenta Placenta
7 chr20:25377800-25380200 Enhancers Fetal Intestine Small intestine
8 chr20:25378000-25379600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
9 chr20:25378000-25380000 Enhancers Foreskin Fibroblast Primary Cells skin02 Skin
10 chr20:25378000-25380200 Enhancers iPS-15b Cell Line embryonic stem cell
11 chr20:25378000-25380400 Enhancers A549 lung
12 chr20:25378200-25379600 Enhancers HepG2 liver
13 chr20:25378200-25379800 Enhancers Duodenum Mucosa Duodenum
14 chr20:25378200-25379800 Enhancers NHLF lung
15 chr20:25378400-25379600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
16 chr20:25378400-25380000 Enhancers Rectal Mucosa Donor 31 rectum
17 chr20:25378600-25379800 Enhancers ES-I3 Cell Line embryonic stem cell
18 chr20:25378600-25379800 Enhancers HUES64 Cell Line embryonic stem cell
19 chr20:25378600-25379800 Enhancers iPS-20b Cell Line embryonic stem cell
20 chr20:25378600-25379800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
21 chr20:25378600-25380000 Enhancers Osteobl bone
22 chr20:25378800-25379600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
23 chr20:25378800-25379800 Enhancers Foreskin Fibroblast Primary Cells skin01 Skin
24 chr20:25378800-25380000 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
25 chr20:25379000-25379800 Enhancers Breast Myoepithelial Primary Cells Breast
26 chr20:25379000-25380000 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
27 chr20:25379000-25380000 Enhancers Brain Anterior Caudate brain
28 chr20:25379000-25380000 Enhancers Brain Dorsolateral Prefrontal Cortex brain
29 chr20:25379000-25380200 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr20:25379000-25380200 Enhancers HUES48 Cell Line embryonic stem cell
31 chr20:25379000-25380200 Enhancers Brain Angular Gyrus brain
32 chr20:25379000-25380200 Enhancers NHDF-Ad bronchial
33 chr20:25379200-25379800 Enhancers hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
34 chr20:25379200-25379800 Enhancers Brain Substantia Nigra brain
35 chr20:25379200-25380000 Enhancers Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
36 chr20:25379200-25380000 Enhancers Brain Cingulate Gyrus brain
37 chr20:25379200-25380200 Enhancers Brain Hippocampus Middle brain
38 chr20:25379200-25380200 Enhancers Brain Inferior Temporal Lobe brain
39 chr20:25379200-25380200 Enhancers Rectal Mucosa Donor 29 rectum
40 chr20:25379200-25381000 Enhancers H9 Derived Neuron Cultured Cells ES cell derived
41 chr20:25379400-25379600 Enhancers ES-WA7 Cell Line embryonic stem cell
42 chr20:25379400-25379600 Enhancers HUES6 Cell Line embryonic stem cell
43 chr20:25379400-25379800 Enhancers Hela-S3 cervix

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