Variant report

Variant	rs869358
Chromosome Location	chr20:25374674-25374675
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr20:25277532..25280083-chr20:25374458..25376489,2	K562	blood:
2	chr20:25369295..25372738-chr20:25374482..25377182,6	MCF-7	breast:

Variant related genes	Relation type
ENSG00000100997	Chromatin interaction

Extended variants
information (count: 176 )
Associated
traits (count: 23 )

rSNPs within LD-proxies of this variant (count:157)

rs_ID	r²[population]
rs1046073	0.82[CEU][hapmap]
rs1047171	0.85[CEU][hapmap];0.93[GIH][hapmap]
rs11087521	0.85[CEU][hapmap]
rs11100	0.81[CEU][hapmap]
rs1130694	0.85[CEU][hapmap];0.89[GIH][hapmap]
rs12428	0.85[CEU][hapmap];0.93[GIH][hapmap]
rs13040726	0.95[YRI][hapmap];0.89[ASN][1000 genomes]
rs1541061	0.87[CEU][hapmap]
rs1888997	0.82[CEU][hapmap]
rs1888999	0.82[CEU][hapmap]
rs1983974	1.00[ASW][hapmap];0.96[CEU][hapmap];1.00[CHB][hapmap];0.96[GIH][hapmap];0.96[LWK][hapmap];1.00[MEX][hapmap];0.98[MKK][hapmap];1.00[TSI][hapmap];0.95[YRI][hapmap];0.85[AFR][1000 genomes];0.84[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2151144	0.81[CEU][hapmap]
rs2227890	0.82[CEU][hapmap];0.93[GIH][hapmap]
rs2227892	0.85[CEU][hapmap]
rs2257233	0.82[CEU][hapmap];0.93[GIH][hapmap]
rs2257461	0.82[CEU][hapmap];0.93[GIH][hapmap]
rs2257649	0.83[AMR][1000 genomes];0.82[EUR][1000 genomes]
rs2257705	0.82[CEU][hapmap];0.93[GIH][hapmap]
rs2257712	0.85[CEU][hapmap]
rs2257991	0.82[CEU][hapmap];0.93[GIH][hapmap]
rs2258066	0.85[CEU][hapmap];0.93[GIH][hapmap]
rs2258135	0.82[CEU][hapmap];0.93[GIH][hapmap]
rs2258201	0.82[CEU][hapmap]
rs2258617	0.82[CEU][hapmap];0.91[GIH][hapmap]
rs2258719	0.82[CEU][hapmap]
rs2258728	0.82[CEU][hapmap];0.91[GIH][hapmap]
rs2258769	0.82[CEU][hapmap]
rs2259837	0.82[CEU][hapmap];0.93[GIH][hapmap]
rs2259961	0.85[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs2260997	0.93[GIH][hapmap]
rs2261109	0.82[CEU][hapmap]
rs2261747	0.82[CEU][hapmap];0.93[GIH][hapmap]
rs2261784	0.84[CEU][hapmap]
rs2297496	0.82[CEU][hapmap];0.93[GIH][hapmap]
rs2297497	0.82[CEU][hapmap];0.93[GIH][hapmap]
rs2387880	0.81[EUR][1000 genomes]
rs2387881	0.82[CEU][hapmap];0.93[GIH][hapmap]
rs2387882	0.80[EUR][1000 genomes]
rs2387883	0.81[EUR][1000 genomes]
rs2387884	0.81[EUR][1000 genomes]
rs2424703	0.82[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs2424704	0.82[CEU][hapmap];0.91[GIH][hapmap]
rs2474777	0.82[CEU][hapmap];0.95[GIH][hapmap]
rs2474780	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[YRI][hapmap];0.85[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs2482911	0.82[CEU][hapmap]
rs2482918	0.82[CEU][hapmap]
rs2482923	0.82[CEU][hapmap]
rs2482927	0.82[CEU][hapmap]
rs2482931	0.82[CEU][hapmap]
rs2482943	0.82[CEU][hapmap]
rs2500399	0.81[CEU][hapmap]
rs2500405	0.82[CEU][hapmap]
rs2500424	0.81[CEU][hapmap]
rs2500430	0.80[EUR][1000 genomes]
rs2500432	0.82[CEU][hapmap]
rs2500433	0.82[CEU][hapmap]
rs2500436	0.82[CEU][hapmap]
rs2500446	0.82[CEU][hapmap]
rs2856	0.85[CEU][hapmap];0.93[GIH][hapmap]
rs35735333	0.83[AFR][1000 genomes];0.96[AMR][1000 genomes];0.91[EUR][1000 genomes]
rs374701	1.00[ASW][hapmap];0.96[CEU][hapmap];1.00[CHB][hapmap];0.98[GIH][hapmap];0.96[LWK][hapmap];1.00[MEX][hapmap];0.98[MKK][hapmap];1.00[TSI][hapmap];0.95[YRI][hapmap];0.84[AFR][1000 genomes];0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3761117	0.85[CEU][hapmap];0.93[GIH][hapmap];0.81[EUR][1000 genomes]
rs376742	1.00[ASW][hapmap];0.96[CEU][hapmap];1.00[CHB][hapmap];0.93[GIH][hapmap];0.93[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.95[YRI][hapmap];0.83[AFR][1000 genomes];0.88[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs390123	0.84[AFR][1000 genomes];0.86[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs397119	0.82[CEU][hapmap];0.91[GIH][hapmap]
rs398036	0.82[CEU][hapmap];0.91[GIH][hapmap]
rs400357	0.84[AMR][1000 genomes];0.90[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs404148	0.92[CEU][hapmap]
rs404775	1.00[ASW][hapmap];0.96[CEU][hapmap];1.00[CHB][hapmap];0.93[GIH][hapmap];0.96[LWK][hapmap];1.00[MEX][hapmap];0.98[MKK][hapmap];1.00[TSI][hapmap];0.95[YRI][hapmap];0.84[AFR][1000 genomes];0.85[AMR][1000 genomes];0.91[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs405822	0.96[CEU][hapmap];1.00[CHB][hapmap];0.95[YRI][hapmap];0.86[AFR][1000 genomes];0.88[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs409853	0.96[CEU][hapmap];1.00[CHB][hapmap];0.95[YRI][hapmap];0.86[AFR][1000 genomes];0.84[AMR][1000 genomes];0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs417110	0.91[GIH][hapmap]
rs422148	0.82[AMR][1000 genomes];0.87[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs422844	0.82[CEU][hapmap]
rs431579	0.91[GIH][hapmap]
rs433352	0.91[GIH][hapmap]
rs437635	0.81[CEU][hapmap]
rs4423675	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[GIH][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];1.00[TSI][hapmap];0.95[YRI][hapmap];0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs443009	1.00[ASW][hapmap];0.96[CEU][hapmap];1.00[CHB][hapmap];0.98[GIH][hapmap];0.93[LWK][hapmap];0.98[MKK][hapmap];1.00[TSI][hapmap];0.95[YRI][hapmap];0.86[AFR][1000 genomes];0.88[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs446649	0.91[GIH][hapmap]
rs449370	0.91[GIH][hapmap]
rs449801	0.89[CEU][hapmap]
rs454723	0.82[CEU][hapmap]
rs4813562	0.85[CEU][hapmap];0.93[GIH][hapmap]
rs4813566	0.81[EUR][1000 genomes]
rs4815398	0.85[CEU][hapmap]
rs4815400	0.85[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs4815411	0.85[CEU][hapmap];0.93[GIH][hapmap]
rs4815412	0.85[CEU][hapmap];0.93[GIH][hapmap]
rs4815413	1.00[CEU][hapmap];1.00[CHB][hapmap];0.90[YRI][hapmap];0.91[AFR][1000 genomes];0.96[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs4815417	0.85[CEU][hapmap];0.93[GIH][hapmap];0.81[EUR][1000 genomes]
rs4815418	0.81[EUR][1000 genomes]
rs4815420	0.81[EUR][1000 genomes]
rs4815429	0.82[AMR][1000 genomes];0.84[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4815431	0.82[AMR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6037095	0.82[CEU][hapmap];0.93[GIH][hapmap]
rs6037097	0.85[CEU][hapmap];0.93[GIH][hapmap]
rs6037103	0.82[CEU][hapmap];0.93[GIH][hapmap]
rs6037105	0.85[CEU][hapmap];0.93[GIH][hapmap];0.80[EUR][1000 genomes]
rs6050532	0.82[CEU][hapmap]
rs6050544	0.82[CEU][hapmap]
rs6050559	0.82[CEU][hapmap];0.93[GIH][hapmap]
rs6050561	0.85[CEU][hapmap];0.93[GIH][hapmap]
rs6050565	0.85[CEU][hapmap];0.93[GIH][hapmap]
rs6050567	0.85[CEU][hapmap];0.93[GIH][hapmap]
rs6050573	0.85[CEU][hapmap];0.93[GIH][hapmap]
rs6050583	0.81[EUR][1000 genomes]
rs6050590	0.81[EUR][1000 genomes]
rs6050598	0.85[CEU][hapmap];0.95[GIH][hapmap]
rs6050599	0.84[CEU][hapmap]
rs6050611	0.82[CEU][hapmap]
rs6050617	0.85[CEU][hapmap]
rs6050626	0.84[CEU][hapmap];0.93[GIH][hapmap]
rs6050679	0.92[CEU][hapmap];1.00[CHB][hapmap];0.96[GIH][hapmap];1.00[MEX][hapmap];0.95[TSI][hapmap];0.82[AMR][1000 genomes];0.83[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6076336	0.82[CEU][hapmap];0.93[GIH][hapmap]
rs6076343	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6076345	0.81[EUR][1000 genomes]
rs6076347	0.92[CEU][hapmap]
rs6076358	0.87[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6076364	0.89[ASN][1000 genomes]
rs6076366	0.89[ASN][1000 genomes]
rs6083804	0.82[CEU][hapmap]
rs6083805	0.82[CEU][hapmap];0.93[GIH][hapmap]
rs6083809	0.85[CEU][hapmap]
rs6083818	0.85[CEU][hapmap];0.93[GIH][hapmap]
rs6083824	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[GIH][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];0.92[MKK][hapmap];1.00[TSI][hapmap];1.00[YRI][hapmap];0.91[AFR][1000 genomes];0.96[AMR][1000 genomes];0.93[EUR][1000 genomes]
rs6083828	0.85[CEU][hapmap];0.93[GIH][hapmap]
rs6083844	0.81[EUR][1000 genomes]
rs6083845	1.00[CEU][hapmap];1.00[CHB][hapmap];0.95[YRI][hapmap];0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6083851	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6083853	0.82[CEU][hapmap]
rs6083860	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6083862	0.85[CEU][hapmap];0.84[GIH][hapmap]
rs6107015	0.81[CEU][hapmap]
rs6107027	1.00[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[GIH][hapmap];1.00[LWK][hapmap];1.00[MEX][hapmap];1.00[MKK][hapmap];0.98[TSI][hapmap];1.00[YRI][hapmap];0.85[AMR][1000 genomes];0.83[EUR][1000 genomes]
rs6107031	0.84[CEU][hapmap]
rs6107045	0.82[CEU][hapmap]
rs6107047	0.81[CEU][hapmap]
rs6115140	0.82[CEU][hapmap]
rs6115156	0.92[AMR][1000 genomes];0.90[EUR][1000 genomes]
rs6115159	0.84[CEU][hapmap]
rs6115188	0.81[AFR][1000 genomes];0.96[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6115191	0.82[CEU][hapmap]
rs6115210	1.00[ASN][1000 genomes]
rs6132845	0.90[ASN][1000 genomes]
rs6138553	0.81[CEU][hapmap]
rs6138572	0.82[CEU][hapmap]
rs6138575	0.82[CEU][hapmap]
rs6138593	0.84[AFR][1000 genomes];0.88[AMR][1000 genomes];0.88[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7020	0.82[CEU][hapmap];0.93[GIH][hapmap]
rs7267979	0.82[CEU][hapmap];0.93[GIH][hapmap]
rs7270835	0.81[CEU][hapmap]
rs7453	0.91[GIH][hapmap]
rs761025	0.81[CEU][hapmap]
rs8123949	0.81[EUR][1000 genomes]
rs84816	0.91[GIH][hapmap]
rs9927	0.87[GIH][hapmap]

Variant overlapped rSNPs/rCNVs (count:19 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1063494	chr20:25067286-25468557	Enhancers Active TSS Weak transcription Transcr. at gene 5' and 3' Strong transcription Flanking Active TSS Bivalent Enhancer Genic enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	53 gene(s)	inside rSNPs	diseases
2	nsv1063016	chr20:25067286-25475629	Enhancers Weak transcription Strong transcription Genic enhancers Active TSS Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	53 gene(s)	inside rSNPs	diseases
3	nsv1065101	chr20:25068046-25466542	Weak transcription Enhancers Strong transcription Genic enhancers Flanking Active TSS Bivalent Enhancer Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	53 gene(s)	inside rSNPs	diseases
4	nsv544220	chr20:25068046-25466542	Flanking Active TSS Weak transcription Strong transcription Enhancers Genic enhancers Active TSS Flanking Bivalent TSS/Enh ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	53 gene(s)	inside rSNPs	diseases
5	nsv531480	chr20:25070067-25472684	Enhancers Flanking Active TSS Strong transcription Weak transcription Genic enhancers Active TSS Bivalent/Poised TSS ZNF genes & repeats Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	53 gene(s)	inside rSNPs	diseases
6	nsv585746	chr20:25071454-25470056	Weak transcription Flanking Active TSS Active TSS Enhancers Bivalent/Poised TSS Strong transcription Genic enhancers ZNF genes & repeats Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	53 gene(s)	inside rSNPs	diseases
7	nsv1062742	chr20:25071454-25475629	Enhancers Flanking Bivalent TSS/Enh Weak transcription Flanking Active TSS Genic enhancers Bivalent Enhancer Strong transcription Bivalent/Poised TSS ZNF genes & repeats Active TSS Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	53 gene(s)	inside rSNPs	diseases
8	nsv949389	chr20:25071454-25506582	Strong transcription Genic enhancers Flanking Active TSS ZNF genes & repeats Weak transcription Enhancers Active TSS Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	54 gene(s)	inside rSNPs	diseases
9	nsv531481	chr20:25080583-25448944	Weak transcription Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Genic enhancers ZNF genes & repeats Strong transcription Active TSS Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	52 gene(s)	inside rSNPs	diseases
10	nsv949479	chr20:25096494-25467359	Weak transcription Enhancers Bivalent Enhancer Strong transcription Active TSS Bivalent/Poised TSS Flanking Active TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	52 gene(s)	inside rSNPs	diseases
11	nsv1061109	chr20:25101715-25472685	Enhancers Weak transcription Genic enhancers Strong transcription Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	52 gene(s)	inside rSNPs	diseases
12	nsv544221	chr20:25101715-25472685	Enhancers Weak transcription Active TSS Strong transcription ZNF genes & repeats Genic enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	52 gene(s)	inside rSNPs	diseases
13	nsv833948	chr20:25231726-25410540	Strong transcription Enhancers Weak transcription Flanking Active TSS ZNF genes & repeats Genic enhancers Active TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases
14	nsv482647	chr20:25308912-25481982	Enhancers Flanking Active TSS Weak transcription Genic enhancers Active TSS ZNF genes & repeats Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	21 gene(s)	inside rSNPs	diseases
15	nsv1056997	chr20:25316663-25492339	Strong transcription Weak transcription Genic enhancers Active TSS Enhancers Flanking Active TSS ZNF genes & repeats Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	20 gene(s)	inside rSNPs	diseases
16	nsv1061058	chr20:25327960-25388841	Flanking Active TSS Enhancers Strong transcription Active TSS Weak transcription ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	16 gene(s)	inside rSNPs	diseases
17	nsv964440	chr20:25351740-25387631	Enhancers Weak transcription Flanking Active TSS Active TSS ZNF genes & repeats Strong transcription Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region	13 gene(s)	inside rSNPs	diseases
18	nsv1067379	chr20:25355484-25593240	Enhancers Weak transcription Flanking Active TSS Strong transcription Genic enhancers Active TSS ZNF genes & repeats Bivalent/Poised TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	24 gene(s)	inside rSNPs	diseases
19	nsv1061398	chr20:25370106-25444076	Enhancers Flanking Active TSS Active TSS Weak transcription Genic enhancers Strong transcription ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region miRNA target site	19 gene(s)	inside rSNPs	diseases

mRNA abundance (count:23)

SNP	Gene	Cis/trans	Tissue	Source
rs869358	NINL	cis	cerebellum	SCAN
rs869358	NINL	cis	parietal	SCAN
rs869358	NINL	cis	Thyroid	GTEx
rs869358	GINS1	Cis_1M	lymphoblastoid	RTeQTL
rs869358	C20orf22	cis	multi-tissue	Pritchard
rs869358	ABHD12	cis	Temporal Cortex	GTEx
rs869358	ABHD12	cis	uninvolved skin	skin_eQTL
rs869358	ABHD12	cis	parietal	SCAN
rs869358	PYGB	cis	lymphoblastoid	seeQTL
rs869358	ABHD12	Cis_1M	lymphoblastoid	RTeQTL
rs869358	GINS1	cis	parietal	SCAN
rs869358	ABHD12	cis	cerebellum	SCAN
rs869358	ABHD12	cis	Brain Pons	GTEx
rs869358	PYGB	cis	Whole Blood	GTEx
rs869358	ENTPD6	cis	cerebellum	SCAN
rs869358	ABHD12	cis	lymphoblastoid	seeQTL
rs869358	PYGB	cis	cerebellum	SCAN
rs869358	ABHD12	cis	Frontal Cortex	GTEx
rs869358	ABHD12	cis	Cerebellum	GTEx
rs869358	ABHD12	cis	multi-tissue	Pritchard
rs869358	PYGB	cis	multi-tissue	Pritchard
rs869358	ZNF337	cis	cerebellum	SCAN
rs869358	ABHD12	cis	lesional skin	skin_eQTL

Chromatin state (count:24 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr20:25372000-25378000	Weak transcription	Foreskin Fibroblast Primary Cells skin02	Skin
2	chr20:25372000-25379000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr20:25372200-25374800	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
4	chr20:25372200-25377600	Weak transcription	Duodenum Mucosa	Duodenum
5	chr20:25372200-25377600	Weak transcription	Rectal Mucosa Donor 31	rectum
6	chr20:25372200-25379000	Weak transcription	Brain Angular Gyrus	brain
7	chr20:25372200-25379000	Weak transcription	Brain Dorsolateral Prefrontal Cortex	brain
8	chr20:25372200-25380800	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
9	chr20:25372400-25375000	Weak transcription	GM12878-XiMat	blood
10	chr20:25372400-25377800	Weak transcription	IMR90 fetal lung fibroblasts Cell Line	lung
11	chr20:25372400-25379000	Weak transcription	Breast Myoepithelial Primary Cells	Breast
12	chr20:25372400-25379200	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
13	chr20:25374000-25376000	Enhancers	Fetal Thymus	thymus
14	chr20:25374200-25375400	Enhancers	Brain Anterior Caudate	brain
15	chr20:25374200-25375800	Bivalent Enhancer	HepG2	liver
16	chr20:25374200-25376000	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
17	chr20:25374400-25374800	Enhancers	Hela-S3	cervix
18	chr20:25374400-25375000	Enhancers	Brain Cingulate Gyrus	brain
19	chr20:25374400-25375200	Enhancers	Brain Hippocampus Middle	brain
20	chr20:25374400-25375400	Enhancers	Thymus	Thymus
21	chr20:25374400-25375800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
22	chr20:25374600-25375000	Enhancers	Brain Inferior Temporal Lobe	brain
23	chr20:25374600-25375200	Enhancers	Brain Substantia Nigra	brain
24	chr20:25374600-25375400	Enhancers	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived

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