Variant report

Variant rs374701
Chromosome Location chr20:25483616-25483617
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:93 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:25427200-25488200 Weak transcription Stomach Mucosa stomach
2 chr20:25430200-25484400 Strong transcription Fetal Stomach stomach
3 chr20:25431800-25484200 Weak transcription Pancreatic Islets Pancreatic Islet
4 chr20:25446000-25489600 Weak transcription Skeletal Muscle Female skeletal muscle
5 chr20:25446400-25488200 Weak transcription Right Atrium heart
6 chr20:25448200-25490600 Weak transcription Sigmoid Colon Sigmoid Colon
7 chr20:25448600-25484200 Weak transcription Duodenum Mucosa Duodenum
8 chr20:25451400-25488800 Weak transcription Rectal Smooth Muscle rectum
9 chr20:25453400-25494400 Strong transcription Brain Germinal Matrix brain
10 chr20:25457800-25489000 Weak transcription Placenta Placenta
11 chr20:25459800-25489800 Weak transcription Rectal Mucosa Donor 29 rectum
12 chr20:25462800-25488200 Weak transcription Colonic Mucosa Colon
13 chr20:25465600-25490000 Weak transcription Brain Angular Gyrus brain
14 chr20:25465800-25488000 Weak transcription Fetal Kidney kidney
15 chr20:25466000-25484200 Weak transcription Fetal Brain Male brain
16 chr20:25467400-25484200 Weak transcription Left Ventricle heart
17 chr20:25467400-25491800 Weak transcription Primary T cells from cord blood blood
18 chr20:25467600-25488000 Strong transcription IMR90 fetal lung fibroblasts Cell Line lung
19 chr20:25468600-25484200 Weak transcription HUVEC blood vessel
20 chr20:25469800-25484200 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
21 chr20:25470000-25488000 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
22 chr20:25470000-25488000 Weak transcription Osteobl bone
23 chr20:25470200-25484200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
24 chr20:25470600-25484200 Weak transcription NHLF lung
25 chr20:25470800-25484200 Weak transcription ES-I3 Cell Line embryonic stem cell
26 chr20:25470800-25484400 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
27 chr20:25471000-25488200 Weak transcription Skeletal Muscle Male skeletal muscle
28 chr20:25472000-25484200 Weak transcription Adipose Nuclei Adipose
29 chr20:25472400-25484200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
30 chr20:25473200-25487800 Weak transcription Fetal Heart heart
31 chr20:25473400-25484400 Strong transcription Ovary ovary
32 chr20:25473400-25494400 Strong transcription Fetal Brain Female brain
33 chr20:25473600-25494600 Strong transcription HUES6 Cell Line embryonic stem cell
34 chr20:25473600-25494600 Strong transcription Breast Myoepithelial Primary Cells Breast
35 chr20:25473800-25485800 Strong transcription Fetal Intestine Small intestine
36 chr20:25473800-25494200 Strong transcription Thymus Thymus
37 chr20:25474400-25495200 Strong transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
38 chr20:25474600-25484400 Strong transcription Fetal Adrenal Gland Adrenal Gland
39 chr20:25474600-25494800 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
40 chr20:25474800-25493400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
41 chr20:25475400-25494000 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
42 chr20:25475400-25498000 Weak transcription Right Ventricle heart
43 chr20:25477000-25494800 Strong transcription iPS-20b Cell Line embryonic stem cell
44 chr20:25477400-25495200 Strong transcription H9 Cell Line embryonic stem cell
45 chr20:25478000-25488000 Weak transcription NH-A brain
46 chr20:25478200-25488000 Weak transcription Muscle Satellite Cultured Cells --
47 chr20:25478200-25494800 Strong transcription Fetal Muscle Trunk muscle
48 chr20:25478400-25487800 Strong transcription A549 lung
49 chr20:25478400-25490000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
50 chr20:25478600-25488400 Weak transcription HSMM muscle

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