Variant report

Variant rs6050601
Chromosome Location chr20:25401003-25401004
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:78 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr20:25388800-25418000 Weak transcription Gastric stomach
2 chr20:25389000-25433600 Weak transcription Sigmoid Colon Sigmoid Colon
3 chr20:25389200-25411000 Weak transcription ES-WA7 Cell Line embryonic stem cell
4 chr20:25389200-25415000 Weak transcription Primary B cells from cord blood blood
5 chr20:25389400-25402400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
6 chr20:25389400-25407000 Weak transcription Fetal Intestine Large intestine
7 chr20:25389400-25407800 Weak transcription Fetal Brain Female brain
8 chr20:25389400-25422800 Weak transcription Duodenum Smooth Muscle Duodenum
9 chr20:25389600-25426400 Weak transcription NH-A brain
10 chr20:25389600-25426600 Weak transcription Primary neutrophils fromperipheralblood blood
11 chr20:25389600-25432200 Weak transcription Fetal Brain Male brain
12 chr20:25389800-25401200 Weak transcription Cortex derived primary cultured neurospheres brain
13 chr20:25389800-25406800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
14 chr20:25389800-25411400 Weak transcription Fetal Kidney kidney
15 chr20:25389800-25417000 Weak transcription Fetal Heart heart
16 chr20:25389800-25417600 Weak transcription HSMM muscle
17 chr20:25389800-25432600 Weak transcription Esophagus oesophagus
18 chr20:25390000-25434800 Weak transcription Rectal Mucosa Donor 29 rectum
19 chr20:25390200-25406600 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr20:25390200-25416200 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
21 chr20:25390400-25417400 Weak transcription Breast Myoepithelial Primary Cells Breast
22 chr20:25390600-25426200 Weak transcription Duodenum Mucosa Duodenum
23 chr20:25390600-25433400 Weak transcription Brain Germinal Matrix brain
24 chr20:25391000-25418400 Strong transcription Primary hematopoietic stem cells short term culture blood
25 chr20:25391600-25416000 Strong transcription HUES64 Cell Line embryonic stem cell
26 chr20:25391600-25416200 Strong transcription HUES48 Cell Line embryonic stem cell
27 chr20:25392200-25430800 Strong transcription Dnd41 blood
28 chr20:25393200-25416400 Strong transcription iPS-20b Cell Line embryonic stem cell
29 chr20:25393400-25406600 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
30 chr20:25393400-25416000 Strong transcription ES-UCSF4 Cell Line embryonic stem cell
31 chr20:25393400-25416400 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
32 chr20:25393600-25416400 Strong transcription HUES6 Cell Line embryonic stem cell
33 chr20:25394200-25401800 Strong transcription HepG2 liver
34 chr20:25394200-25416200 Strong transcription H1 Cell Line embryonic stem cell
35 chr20:25394800-25410400 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
36 chr20:25395000-25416200 Strong transcription iPS-18 Cell Line embryonic stem cell
37 chr20:25396000-25401600 Strong transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
38 chr20:25396600-25404200 Strong transcription H9 Cell Line embryonic stem cell
39 chr20:25397600-25402600 Weak transcription Primary hematopoietic stem cells blood
40 chr20:25397800-25402000 Strong transcription Fetal Stomach stomach
41 chr20:25398800-25403600 Weak transcription Fetal Intestine Small intestine
42 chr20:25398800-25407800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
43 chr20:25398800-25429800 Weak transcription Hela-S3 cervix
44 chr20:25399000-25401800 Strong transcription Fetal Muscle Leg muscle
45 chr20:25399600-25406400 Weak transcription Osteobl bone
46 chr20:25399600-25410800 Weak transcription Fetal Thymus thymus
47 chr20:25399600-25417600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
48 chr20:25399800-25401200 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
49 chr20:25399800-25401200 Weak transcription HUVEC blood vessel
50 chr20:25399800-25401600 Weak transcription NHDF-Ad bronchial

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