Variant report

Variant rs2517679
Chromosome Location chr6:29933169-29933170
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:124 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:29916800-29933200 Weak transcription Lung lung
2 chr6:29916800-29940200 Weak transcription Gastric stomach
3 chr6:29927800-29938800 Weak transcription Spleen Spleen
4 chr6:29932000-29934200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
5 chr6:29932200-29933200 Enhancers Brain Angular Gyrus brain
6 chr6:29932200-29933200 Flanking Active TSS Hela-S3 cervix
7 chr6:29932200-29933400 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
8 chr6:29932200-29933800 Flanking Active TSS Brain Cingulate Gyrus brain
9 chr6:29932200-29934000 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
10 chr6:29932200-29934000 Flanking Active TSS Foreskin Melanocyte Primary Cells skin03 Skin
11 chr6:29932200-29934000 Enhancers Brain Germinal Matrix brain
12 chr6:29932200-29934200 Enhancers hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
13 chr6:29932200-29934200 Flanking Active TSS Primary neutrophils fromperipheralblood blood
14 chr6:29932200-29934200 Flanking Active TSS Primary hematopoietic stem cells short term culture blood
15 chr6:29932200-29934200 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
16 chr6:29932200-29934200 Flanking Active TSS Adipose Nuclei Adipose
17 chr6:29932200-29934200 Flanking Active TSS Colon Smooth Muscle Colon
18 chr6:29932200-29934200 Flanking Active TSS HMEC breast
19 chr6:29932200-29934400 Flanking Active TSS HUES48 Cell Line embryonic stem cell
20 chr6:29932200-29934400 Flanking Active TSS Primary B cells from cord blood blood
21 chr6:29932200-29934600 Flanking Active TSS Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
22 chr6:29932200-29934600 Flanking Active TSS Muscle Satellite Cultured Cells --
23 chr6:29932200-29934600 Flanking Active TSS Skeletal Muscle Male skeletal muscle
24 chr6:29932200-29934600 Flanking Active TSS Dnd41 blood
25 chr6:29932200-29934800 Flanking Active TSS HUES6 Cell Line embryonic stem cell
26 chr6:29932200-29934800 Enhancers ES-UCSF4 Cell Line embryonic stem cell
27 chr6:29932200-29934800 Enhancers Primary B cells from peripheral blood blood
28 chr6:29932200-29934800 Flanking Active TSS Monocytes-CD14+_RO01746 blood
29 chr6:29932200-29935600 Enhancers Fetal Lung lung
30 chr6:29932200-29936200 Enhancers Fetal Intestine Small intestine
31 chr6:29932400-29933200 Active TSS Sigmoid Colon Sigmoid Colon
32 chr6:29932400-29933400 Flanking Active TSS Primary T killer naive cells fromperipheralblood blood
33 chr6:29932400-29933600 Active TSS Psoas Muscle Psoas
34 chr6:29932400-29934000 Flanking Active TSS Primary T cells from cord blood blood
35 chr6:29932400-29934000 Flanking Active TSS Ganglion Eminence derived primary cultured neurospheres brain
36 chr6:29932400-29934000 Active TSS Left Ventricle heart
37 chr6:29932400-29934200 Flanking Active TSS Primary T helper naive cells fromperipheralblood blood
38 chr6:29932400-29934200 Flanking Active TSS Brain Hippocampus Middle brain
39 chr6:29932400-29934200 Flanking Active TSS HUVEC blood vessel
40 chr6:29932400-29934200 Flanking Active TSS NHEK skin
41 chr6:29932400-29934400 Flanking Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
42 chr6:29932400-29934400 Flanking Active TSS Primary T helper cells PMA-I stimulated --
43 chr6:29932400-29935000 Flanking Active TSS Duodenum Mucosa Duodenum
44 chr6:29932400-29935000 Flanking Active TSS Rectal Mucosa Donor 29 rectum
45 chr6:29932600-29933200 Active TSS ES-I3 Cell Line embryonic stem cell
46 chr6:29932600-29933200 Flanking Active TSS Brain Dorsolateral Prefrontal Cortex brain
47 chr6:29932600-29933400 Active TSS Duodenum Smooth Muscle Duodenum
48 chr6:29932600-29933600 Active TSS Primary T cells effector/memory enriched fromperipheralblood blood
49 chr6:29932600-29933600 Flanking Active TSS Cortex derived primary cultured neurospheres brain
50 chr6:29932600-29933600 Active TSS Pancreatic Islets Pancreatic Islet

Quick Search:


  
Input of quick search could be:

what's new

Quick links