Variant report

Variant rs2517682
Chromosome Location chr6:29932109-29932110
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:79 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:29913400-29932200 Weak transcription Brain Anterior Caudate brain
2 chr6:29913400-29932600 Weak transcription Brain Substantia Nigra brain
3 chr6:29913800-29932200 Weak transcription Small Intestine intestine
4 chr6:29914000-29932200 Weak transcription Colon Smooth Muscle Colon
5 chr6:29914600-29932200 Weak transcription Colonic Mucosa Colon
6 chr6:29914800-29932200 Weak transcription Right Ventricle heart
7 chr6:29916800-29932200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
8 chr6:29916800-29932200 Weak transcription Rectal Mucosa Donor 31 rectum
9 chr6:29916800-29932200 Weak transcription Sigmoid Colon Sigmoid Colon
10 chr6:29916800-29933000 Weak transcription Esophagus oesophagus
11 chr6:29916800-29933000 Weak transcription Pancreas Pancrea
12 chr6:29916800-29933200 Weak transcription Lung lung
13 chr6:29916800-29940200 Weak transcription Gastric stomach
14 chr6:29917200-29932200 Weak transcription Liver Liver
15 chr6:29917200-29932200 Weak transcription Brain Hippocampus Middle brain
16 chr6:29917800-29932200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
17 chr6:29918000-29932200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
18 chr6:29918000-29932200 Weak transcription Fetal Intestine Small intestine
19 chr6:29920400-29932200 Weak transcription Duodenum Smooth Muscle Duodenum
20 chr6:29921800-29932200 Weak transcription Skeletal Muscle Male skeletal muscle
21 chr6:29924600-29932200 Weak transcription Left Ventricle heart
22 chr6:29924600-29932200 Weak transcription Right Atrium heart
23 chr6:29924800-29932200 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
24 chr6:29924800-29933000 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
25 chr6:29926200-29932600 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
26 chr6:29927800-29932200 Weak transcription Primary B cells from peripheral blood blood
27 chr6:29927800-29938800 Weak transcription Spleen Spleen
28 chr6:29928400-29932200 Weak transcription Fetal Muscle Leg muscle
29 chr6:29929400-29932200 Weak transcription Pancreatic Islets Pancreatic Islet
30 chr6:29930000-29932200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
31 chr6:29930000-29932200 Weak transcription Psoas Muscle Psoas
32 chr6:29930200-29932200 Weak transcription Fetal Lung lung
33 chr6:29930200-29932200 Weak transcription Monocytes-CD14+_RO01746 blood
34 chr6:29930400-29932200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
35 chr6:29930800-29932200 Weak transcription Primary T regulatory cells fromperipheralblood blood
36 chr6:29930800-29932200 Weak transcription Skeletal Muscle Female skeletal muscle
37 chr6:29931200-29932200 Enhancers Primary hematopoietic stem cells short term culture blood
38 chr6:29931200-29932200 Weak transcription Primary Natural Killer cells fromperipheralblood blood
39 chr6:29931600-29932200 Enhancers Dnd41 blood
40 chr6:29931800-29932200 Enhancers Primary neutrophils fromperipheralblood blood
41 chr6:29931800-29932200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
42 chr6:29931800-29932200 Enhancers Adipose Nuclei Adipose
43 chr6:29931800-29932200 Enhancers K562 blood
44 chr6:29931800-29932400 Enhancers H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
45 chr6:29931800-29932400 Enhancers Primary T cells from cord blood blood
46 chr6:29931800-29932400 Enhancers Primary T helper naive cells from peripheral blood blood
47 chr6:29931800-29932400 Enhancers Primary T helper cells PMA-I stimulated --
48 chr6:29931800-29932400 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
49 chr6:29931800-29932400 Enhancers Fetal Adrenal Gland Adrenal Gland
50 chr6:29931800-29932400 Enhancers Fetal Thymus thymus

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