Variant report

Variant rs2554779
Chromosome Location chr15:34729178-34729179
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:122 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr15:34727800-34729200 Transcr. at gene 5' and 3' Primary T helper 17 cells PMA-I stimulated --
2 chr15:34727800-34730200 Active TSS HSMM muscle
3 chr15:34728000-34729200 Flanking Active TSS Primary T helper cells fromperipheralblood blood
4 chr15:34728000-34729400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
5 chr15:34728000-34729400 Flanking Active TSS Stomach Smooth Muscle stomach
6 chr15:34728200-34729200 Flanking Active TSS Primary T cells fromperipheralblood blood
7 chr15:34728200-34729200 Flanking Bivalent TSS/Enh Fetal Muscle Leg muscle
8 chr15:34728200-34729600 Active TSS HepG2 liver
9 chr15:34728200-34730200 Active TSS GM12878-XiMat blood
10 chr15:34728200-34730200 Active TSS Hela-S3 cervix
11 chr15:34728200-34730400 Active TSS Fetal Brain Female brain
12 chr15:34728400-34729200 Flanking Active TSS Adipose Nuclei Adipose
13 chr15:34728400-34729200 Flanking Bivalent TSS/Enh Monocytes-CD14+_RO01746 blood
14 chr15:34728400-34729400 Active TSS Rectal Smooth Muscle rectum
15 chr15:34728400-34729600 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Female --
16 chr15:34728400-34729800 Bivalent/Poised TSS HUES48 Cell Line embryonic stem cell
17 chr15:34728400-34730200 Active TSS IMR90 fetal lung fibroblasts Cell Line lung
18 chr15:34728400-34730200 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
19 chr15:34728400-34730400 Bivalent/Poised TSS iPS-20b Cell Line embryonic stem cell
20 chr15:34728400-34730400 Active TSS Breast Myoepithelial Primary Cells Breast
21 chr15:34728400-34730400 Active TSS Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
22 chr15:34728400-34730400 Active TSS Rectal Mucosa Donor 29 rectum
23 chr15:34728400-34730400 Active TSS Right Atrium heart
24 chr15:34728400-34730400 Active TSS NHDF-Ad bronchial
25 chr15:34728400-34730600 Active TSS Primary T helper cells PMA-I stimulated --
26 chr15:34728600-34729200 Bivalent/Poised TSS ES-I3 Cell Line embryonic stem cell
27 chr15:34728600-34729200 Bivalent/Poised TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
28 chr15:34728600-34729200 Bivalent Enhancer Primary neutrophils fromperipheralblood blood
29 chr15:34728600-34729200 Flanking Active TSS Primary Natural Killer cells fromperipheralblood blood
30 chr15:34728600-34729200 Flanking Bivalent TSS/Enh Brain Germinal Matrix brain
31 chr15:34728600-34729200 Flanking Bivalent TSS/Enh Fetal Adrenal Gland Adrenal Gland
32 chr15:34728600-34729200 Flanking Bivalent TSS/Enh Fetal Intestine Small intestine
33 chr15:34728600-34729200 Active TSS Fetal Kidney kidney
34 chr15:34728600-34729200 Flanking Bivalent TSS/Enh Fetal Stomach stomach
35 chr15:34728600-34729200 Flanking Active TSS Skeletal Muscle Male skeletal muscle
36 chr15:34728600-34729400 Bivalent/Poised TSS iPS-15b Cell Line embryonic stem cell
37 chr15:34728600-34729600 Flanking Active TSS Primary hematopoietic stem cells blood
38 chr15:34728600-34729600 Active TSS Primary T helper memory cells from peripheral blood 2 blood
39 chr15:34728600-34729600 Enhancers Sigmoid Colon Sigmoid Colon
40 chr15:34728600-34730000 Active TSS K562 blood
41 chr15:34728600-34730000 Active TSS NHEK skin
42 chr15:34728600-34730200 Active TSS H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
43 chr15:34728600-34730200 Active TSS H9 Cell Line embryonic stem cell
44 chr15:34728600-34730200 Bivalent/Poised TSS hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
45 chr15:34728600-34730200 Active TSS hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
46 chr15:34728600-34730200 Bivalent/Poised TSS HUES64 Cell Line embryonic stem cell
47 chr15:34728600-34730200 Active TSS iPS DF 19.11 Cell Line embryonic stem cell
48 chr15:34728600-34730200 Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
49 chr15:34728600-34730200 Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
50 chr15:34728600-34730200 Active TSS Primary T helper naive cells from peripheral blood blood

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