Variant report

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr11:36600352..36602447-chr11:36604376..36607300,2	MCF-7	breast:

rSNPs within LD-proxies of this variant (count:33)

rs_ID	r²[population]
rs1515062	1.00[YRI][hapmap];1.00[EUR][1000 genomes]
rs1581279	1.00[EUR][1000 genomes]
rs2173394	1.00[YRI][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs230485	1.00[EUR][1000 genomes]
rs2458930	1.00[EUR][1000 genomes]
rs2673018	1.00[EUR][1000 genomes]
rs331431	1.00[EUR][1000 genomes]
rs331438	1.00[EUR][1000 genomes]
rs331451	1.00[EUR][1000 genomes]
rs331452	1.00[EUR][1000 genomes]
rs331458	1.00[EUR][1000 genomes]
rs331461	1.00[EUR][1000 genomes]
rs331473	1.00[EUR][1000 genomes]
rs34340782	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs34392904	1.00[EUR][1000 genomes]
rs34574486	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs34608958	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs4756326	1.00[YRI][hapmap]
rs4756327	1.00[YRI][hapmap]
rs496289	1.00[EUR][1000 genomes]
rs505296	1.00[EUR][1000 genomes]
rs510479	1.00[EUR][1000 genomes]
rs520074	1.00[EUR][1000 genomes]
rs60225227	1.00[EUR][1000 genomes]
rs60287310	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs61475582	0.80[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6484862	1.00[EUR][1000 genomes]
rs6484865	1.00[YRI][hapmap]
rs692743	1.00[EUR][1000 genomes]
rs693068	1.00[EUR][1000 genomes]
rs7109588	1.00[YRI][hapmap];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7125448	1.00[EUR][1000 genomes]
rs962353	0.93[YRI][hapmap]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv467791	chr11:36108497-36999385	Flanking Active TSS Weak transcription Strong transcription Enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Active TSS Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	18 gene(s)	inside rSNPs	diseases
2	nsv554003	chr11:36108497-36999385	ZNF genes & repeats Weak transcription Active TSS Enhancers Strong transcription Flanking Active TSS Genic enhancers Transcr. at gene 5' and 3' Bivalent/Poised TSS Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	18 gene(s)	inside rSNPs	diseases
3	nsv832123	chr11:36582872-36757443	Enhancers Weak transcription Flanking Active TSS Active TSS Bivalent Enhancer Strong transcription Flanking Bivalent TSS/Enh Bivalent/Poised TSS ZNF genes & repeats Genic enhancers Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	4 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr11:36596400-36602400	Weak transcription	Pancreas	Pancrea
2	chr11:36596600-36603000	Weak transcription	Left Ventricle	heart
3	chr11:36597000-36602600	Weak transcription	Fetal Intestine Small	intestine
4	chr11:36600600-36601800	Weak transcription	Thymus	Thymus
5	chr11:36600600-36602000	Weak transcription	Rectal Smooth Muscle	rectum
6	chr11:36601000-36601800	Weak transcription	Fetal Thymus	thymus
7	chr11:36601000-36602000	Strong transcription	Dnd41	blood

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