Variant report

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	FOXA1	chr12:121794439-121794884	HepG2	liver:	n/a	n/a
2	FOXA2	chr12:121794534-121794792	HepG2	liver:	n/a	n/a
3	FOXA1	chr12:121794487-121794950	HepG2	liver:	n/a	n/a

No.	Distal block	Cell Line	Cell type
1	chr12:121794483..121795989-chr12:121796184..121798328,2	K562	blood:
2	chr12:121789591..121792707-chr12:121794355..121797519,4	MCF-7	breast:
3	chr12:121789114..121791838-chr12:121794744..121797227,2	MCF-7	breast:

Variant related genes	Relation type
ANAPC5	TF binding region
ENSG00000089053	Chromatin interaction

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs11065536	0.93[ASN][1000 genomes]
rs1169961	0.95[CHB][hapmap];0.90[CHD][hapmap];1.00[JPT][hapmap];0.85[MEX][hapmap];0.96[ASN][1000 genomes]
rs1169962	0.93[ASN][1000 genomes]
rs1169963	0.82[CHB][hapmap];0.89[CHD][hapmap];0.95[JPT][hapmap];0.84[MEX][hapmap];0.93[ASN][1000 genomes]
rs1622534	0.97[ASN][1000 genomes]
rs1624953	0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs1647253	0.88[ASW][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];1.00[MEX][hapmap];1.00[TSI][hapmap];0.96[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1647256	0.91[CHB][hapmap];0.95[JPT][hapmap];0.93[ASN][1000 genomes]
rs1706463	0.83[ASN][1000 genomes]
rs1799525	0.91[CHB][hapmap];0.95[JPT][hapmap];0.93[ASN][1000 genomes]
rs1799526	0.95[AMR][1000 genomes];1.00[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2668259	0.90[AFR][1000 genomes];0.96[ASN][1000 genomes]
rs2668260	0.83[AFR][1000 genomes];0.81[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs2668262	0.95[JPT][hapmap];0.93[ASN][1000 genomes]
rs2695142	0.85[ASN][1000 genomes]
rs2695143	0.81[ASN][1000 genomes]
rs2695149	0.93[ASN][1000 genomes]
rs2942074	0.88[ASN][1000 genomes]
rs2950417	0.96[AMR][1000 genomes];0.88[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7397643	0.93[ASN][1000 genomes]
rs7398701	0.97[ASN][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:121791000-121795800	Weak transcription	Pancreatic Islets	Pancreatic Islet
2	chr12:121791200-121795600	Weak transcription	Rectal Mucosa Donor 31	rectum
3	chr12:121791200-121795800	Weak transcription	Liver	Liver
4	chr12:121791200-121795800	Weak transcription	Fetal Intestine Small	intestine
5	chr12:121791200-121796000	Weak transcription	A549	lung
6	chr12:121792200-121796400	Enhancers	HepG2	liver

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