Variant report

No.	Distal block	Cell Line	Cell type
1	chr12:121792535..121794507-chr12:121806611..121808238,2	K562	blood:
2	chr12:121792747..121794642-chr12:121835239..121837856,2	K562	blood:
3	chr12:121788511..121790384-chr12:121791177..121794570,4	K562	blood:

Variant related genes	Relation type
ENSG00000089053	Chromatin interaction
ENSG00000170633	Chromatin interaction

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs11065536	0.84[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs1169961	0.91[AMR][1000 genomes];0.84[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1169962	0.84[AFR][1000 genomes];0.83[AMR][1000 genomes];0.81[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1169963	0.91[ASN][1000 genomes]
rs1622534	0.94[AFR][1000 genomes];0.94[AMR][1000 genomes];0.86[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1624953	0.92[ASN][1000 genomes]
rs1647253	0.97[ASN][1000 genomes]
rs1647256	0.97[AFR][1000 genomes];0.94[AMR][1000 genomes];0.86[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1706463	0.86[ASN][1000 genomes]
rs1799525	0.96[ASN][1000 genomes]
rs1799526	0.95[ASN][1000 genomes]
rs2668259	0.86[AMR][1000 genomes];0.82[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2668260	0.93[ASN][1000 genomes]
rs2668262	0.91[ASN][1000 genomes]
rs2695142	0.82[ASN][1000 genomes]
rs2695148	0.97[ASN][1000 genomes]
rs2695149	0.97[AFR][1000 genomes];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2942074	0.88[AMR][1000 genomes];0.84[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs2950417	0.96[ASN][1000 genomes]
rs7397643	0.92[AMR][1000 genomes];0.90[EUR][1000 genomes];0.96[ASN][1000 genomes]

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs7398701	ANAPC5	cis	Muscle Skeletal	GTEx

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr12:121791000-121795800	Weak transcription	Pancreatic Islets	Pancreatic Islet
2	chr12:121791200-121795600	Weak transcription	Rectal Mucosa Donor 31	rectum
3	chr12:121791200-121795800	Weak transcription	Liver	Liver
4	chr12:121791200-121795800	Weak transcription	Fetal Intestine Small	intestine
5	chr12:121791200-121796000	Weak transcription	A549	lung
6	chr12:121792200-121796400	Enhancers	HepG2	liver

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