Variant report

Variant	rs2695149
Chromosome Location	chr12:121796528-121796529
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 1 )

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs11065536	0.81[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs1169961	0.88[AMR][1000 genomes];0.81[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1169962	0.84[AFR][1000 genomes];0.83[AMR][1000 genomes];0.92[ASN][1000 genomes]
rs1169963	0.87[ASN][1000 genomes]
rs1622534	0.90[AFR][1000 genomes];0.91[AMR][1000 genomes];0.82[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs1624953	0.96[ASN][1000 genomes]
rs1647253	0.93[ASN][1000 genomes]
rs1647256	0.93[AFR][1000 genomes];0.91[AMR][1000 genomes];0.82[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs1706463	0.83[ASN][1000 genomes]
rs1799525	0.99[ASN][1000 genomes]
rs1799526	0.91[ASN][1000 genomes]
rs2668259	0.84[AMR][1000 genomes];0.96[ASN][1000 genomes]
rs2668260	0.89[ASN][1000 genomes]
rs2668262	0.87[ASN][1000 genomes]
rs2695148	0.93[ASN][1000 genomes]
rs2942074	0.85[AMR][1000 genomes];0.84[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2950417	0.92[ASN][1000 genomes]
rs7397643	0.89[AMR][1000 genomes];0.86[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs7398701	0.97[AFR][1000 genomes];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.96[ASN][1000 genomes]

mRNA abundance (count:1)

SNP	Gene	Cis/trans	Tissue	Source
rs2695149	ANAPC5	cis	Muscle Skeletal	GTEx

Chromatin state (count:0 , 50 per page) page:

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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