Variant report

Variant	rs2767512
Chromosome Location	chr1:56158236-56158237
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr1:56137224..56139616-chr1:56156746..56159633,2	K562	blood:
2	chr1:56156698..56158897-chr1:56161662..56164222,3	K562	blood:

Extended variants
information (count: 20 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10888938	0.86[ASN][1000 genomes]
rs1165479	0.81[CHB][hapmap]
rs1514139	0.94[ASN][1000 genomes]
rs1514140	0.94[CHB][hapmap];0.90[CHD][hapmap];1.00[JPT][hapmap];0.93[ASN][1000 genomes]
rs2137830	0.89[ASN][1000 genomes]
rs2175861	0.81[ASN][1000 genomes]
rs2671230	0.91[EUR][1000 genomes]
rs2671235	1.00[CEU][hapmap];0.94[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2671246	0.93[CEU][hapmap];0.94[CHB][hapmap];0.88[CHD][hapmap];1.00[JPT][hapmap];0.94[TSI][hapmap];0.91[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs2671258	1.00[CHB][hapmap];0.97[CHD][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs2767501	1.00[CHB][hapmap];0.97[CHD][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]
rs2767505	0.91[AFR][1000 genomes];1.00[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs2767506	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs2767511	0.81[CHB][hapmap];0.85[CHD][hapmap]
rs2767517	1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.89[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2819470	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2819471	0.95[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2819483	0.91[ASW][hapmap];1.00[CEU][hapmap];1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap];0.96[LWK][hapmap];1.00[MEX][hapmap];0.94[MKK][hapmap];1.00[TSI][hapmap];0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7518530	1.00[CHB][hapmap];1.00[JPT][hapmap];0.96[ASN][1000 genomes]
rs9436523	0.88[CHB][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:56135800-56162000	Weak transcription	Aorta	Aorta
2	chr1:56151400-56159200	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
3	chr1:56153400-56158400	Weak transcription	NHDF-Ad	bronchial
4	chr1:56155800-56160000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
5	chr1:56156200-56159000	Weak transcription	Fetal Muscle Leg	muscle
6	chr1:56156400-56159200	Weak transcription	Breast Myoepithelial Primary Cells	Breast
7	chr1:56156400-56159200	Weak transcription	Fetal Intestine Large	intestine
8	chr1:56156400-56159800	Weak transcription	Osteobl	bone
9	chr1:56156400-56160400	Weak transcription	Spleen	Spleen
10	chr1:56156600-56159000	Weak transcription	Fetal Heart	heart
11	chr1:56156600-56159800	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
12	chr1:56156600-56160400	Weak transcription	Adipose Nuclei	Adipose
13	chr1:56156800-56159600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
14	chr1:56156800-56159600	Weak transcription	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived

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