Variant report

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	FAM48A	chr6:37399200-37399306	GM12878	blood:	n/a	n/a

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr6:37376102..37378184-chr6:37397531..37399649,2	K562	blood:
2	chr6:36953605..36955180-chr6:37399250..37401093,2	K562	blood:

Variant related genes	Relation type
CMTR1	TF binding region
ENSG00000137409	Chromatin interaction

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs2173314	0.85[CEU][hapmap];1.00[MEX][hapmap];0.87[TSI][hapmap]
rs2776915	0.84[AFR][1000 genomes];0.86[AMR][1000 genomes];0.97[EUR][1000 genomes]
rs2776919	1.00[CEU][hapmap];0.94[EUR][1000 genomes]
rs28581421	0.88[EUR][1000 genomes]
rs59158311	0.94[EUR][1000 genomes]
rs6904458	1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.82[MEX][hapmap];1.00[TSI][hapmap];0.91[EUR][1000 genomes]
rs6904652	0.85[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];1.00[TSI][hapmap];0.97[EUR][1000 genomes]
rs6917159	0.88[EUR][1000 genomes]
rs6919260	0.94[EUR][1000 genomes]
rs6940323	1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.82[MEX][hapmap];1.00[TSI][hapmap];0.97[EUR][1000 genomes]
rs6942190	0.97[EUR][1000 genomes]
rs73409227	0.97[EUR][1000 genomes]
rs73730776	0.88[EUR][1000 genomes]
rs7751388	1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.82[MEX][hapmap];1.00[TSI][hapmap]
rs9462313	1.00[CEU][hapmap];1.00[CHD][hapmap];1.00[GIH][hapmap];0.82[MEX][hapmap];1.00[TSI][hapmap];0.97[EUR][1000 genomes]
rs9462316	0.94[EUR][1000 genomes]
rs9470595	0.94[EUR][1000 genomes]
rs9470599	0.97[EUR][1000 genomes]
rs9470601	1.00[CEU][hapmap];0.94[EUR][1000 genomes]
rs9470604	0.88[EUR][1000 genomes]

No data

Chromatin state (count:7 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:37395200-37400000	Weak transcription	Duodenum Mucosa	Duodenum
2	chr6:37395200-37400000	Weak transcription	HepG2	liver
3	chr6:37396200-37400200	Weak transcription	Foreskin Keratinocyte Primary Cells skin03	Skin
4	chr6:37398000-37400200	Weak transcription	HSMMtube	muscle
5	chr6:37399000-37400200	Enhancers	K562	blood
6	chr6:37399200-37400000	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
7	chr6:37399200-37400000	Weak transcription	NHEK	skin

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