Variant report

Variant	rs2786125
Chromosome Location	chr1:103462473-103462474
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 330 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:300)

rs_ID	r²[population]
rs1012282	1.00[JPT][hapmap]
rs1012283	0.95[ASN][1000 genomes]
rs1031820	0.80[ASN][1000 genomes]
rs10493988	1.00[JPT][hapmap]
rs10493991	0.82[CHB][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs10735777	0.90[ASN][1000 genomes]
rs10782918	0.95[ASN][1000 genomes]
rs10782921	0.82[CHB][hapmap];1.00[JPT][hapmap];0.90[ASN][1000 genomes]
rs10874668	1.00[JPT][hapmap]
rs10874672	1.00[ASN][1000 genomes]
rs10874679	1.00[JPT][hapmap]
rs11164648	1.00[JPT][hapmap]
rs11164649	1.00[JPT][hapmap]
rs11164653	1.00[JPT][hapmap]
rs11164658	0.82[CHB][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs11164665	1.00[JPT][hapmap]
rs11164668	1.00[JPT][hapmap]
rs11164672	1.00[JPT][hapmap]
rs11809524	1.00[JPT][hapmap]
rs11811018	0.82[CHB][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs12025848	1.00[JPT][hapmap]
rs12047268	1.00[JPT][hapmap]
rs12092111	1.00[JPT][hapmap]
rs12118365	1.00[JPT][hapmap]
rs12119459	0.82[CHB][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs12119661	0.82[ASN][1000 genomes]
rs12121641	0.90[ASN][1000 genomes]
rs12123031	0.82[CHB][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs12124588	1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs12125729	0.95[ASN][1000 genomes]
rs12126622	0.95[ASN][1000 genomes]
rs12127590	0.82[CHB][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs12136338	0.82[CHB][hapmap];1.00[JPT][hapmap];0.85[ASN][1000 genomes]
rs12136748	0.95[ASN][1000 genomes]
rs12139120	1.00[JPT][hapmap]
rs12142524	0.95[ASN][1000 genomes]
rs12142575	1.00[JPT][hapmap]
rs12143676	0.95[ASN][1000 genomes]
rs1241162	1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs1241164	0.82[CHB][hapmap];0.87[ASN][1000 genomes]
rs1241165	0.87[ASN][1000 genomes]
rs1241166	0.82[CHB][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs1241181	0.82[CHB][hapmap];1.00[JPT][hapmap];0.83[ASN][1000 genomes]
rs1241182	0.82[CHB][hapmap];1.00[JPT][hapmap];0.83[ASN][1000 genomes]
rs1241183	0.82[CHB][hapmap];1.00[JPT][hapmap];0.83[ASN][1000 genomes]
rs12722908	0.85[ASN][1000 genomes]
rs12723167	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs12723432	0.90[ASN][1000 genomes]
rs12723922	0.82[CHB][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs12724152	0.82[CHB][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs12725698	0.95[ASN][1000 genomes]
rs12726009	0.95[ASN][1000 genomes]
rs12726958	0.82[CHB][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs12727675	0.92[ASN][1000 genomes]
rs12727959	0.82[CHB][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs12728397	0.82[CHB][hapmap];1.00[JPT][hapmap];0.82[ASN][1000 genomes]
rs12728656	0.95[ASN][1000 genomes]
rs12728737	1.00[ASN][1000 genomes]
rs12728819	0.95[ASN][1000 genomes]
rs12729449	0.82[CHB][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs12729588	0.95[ASN][1000 genomes]
rs12729602	0.82[CHB][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs12729803	0.95[ASN][1000 genomes]
rs12729964	0.95[ASN][1000 genomes]
rs12730712	0.85[ASN][1000 genomes]
rs12731575	0.80[ASN][1000 genomes]
rs12731591	0.95[ASN][1000 genomes]
rs12731622	0.87[ASN][1000 genomes]
rs12731843	0.82[CHB][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs12733029	0.90[ASN][1000 genomes]
rs12733087	0.90[ASN][1000 genomes]
rs12733164	0.90[ASN][1000 genomes]
rs12733249	0.90[ASN][1000 genomes]
rs12733933	0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs12734491	0.90[ASN][1000 genomes]
rs12735139	0.85[ASN][1000 genomes]
rs12736509	0.87[ASN][1000 genomes]
rs12737364	0.90[ASN][1000 genomes]
rs12738118	0.84[ASN][1000 genomes]
rs12738133	0.82[CHB][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs12740092	0.90[ASN][1000 genomes]
rs12740462	0.95[ASN][1000 genomes]
rs12741474	0.82[ASN][1000 genomes]
rs12742130	1.00[ASN][1000 genomes]
rs12742332	0.84[ASN][1000 genomes]
rs12742440	1.00[ASN][1000 genomes]
rs12742552	0.84[ASN][1000 genomes]
rs12742761	0.84[ASN][1000 genomes]
rs12743150	1.00[ASN][1000 genomes]
rs12743365	0.82[CHB][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs12744290	0.82[CHB][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs12744488	0.82[CHB][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs12748084	0.92[ASN][1000 genomes]
rs12748384	0.95[ASN][1000 genomes]
rs12748883	0.85[ASN][1000 genomes]
rs12749162	0.85[ASN][1000 genomes]
rs12749361	0.89[ASN][1000 genomes]
rs12749367	0.89[ASN][1000 genomes]
rs12749646	0.95[ASN][1000 genomes]
rs12750147	0.95[ASN][1000 genomes]
rs12750176	0.95[ASN][1000 genomes]
rs12750179	0.95[ASN][1000 genomes]
rs12750303	0.95[ASN][1000 genomes]
rs12750377	0.82[CHB][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs12750407	0.95[ASN][1000 genomes]
rs12753436	0.90[ASN][1000 genomes]
rs12753580	1.00[ASN][1000 genomes]
rs12753781	1.00[ASN][1000 genomes]
rs12754215	0.95[ASN][1000 genomes]
rs12754301	0.90[ASN][1000 genomes]
rs12754606	0.95[ASN][1000 genomes]
rs12756627	0.82[CHB][hapmap];1.00[JPT][hapmap];0.92[ASN][1000 genomes]
rs12757655	0.87[ASN][1000 genomes]
rs12757965	0.80[ASN][1000 genomes]
rs1337174	0.82[CHB][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs1337175	0.82[CHB][hapmap];1.00[JPT][hapmap];0.89[ASN][1000 genomes]
rs1337176	0.95[ASN][1000 genomes]
rs1337177	0.95[ASN][1000 genomes]
rs1337178	0.95[ASN][1000 genomes]
rs1337186	1.00[JPT][hapmap]
rs13374456	0.90[ASN][1000 genomes]
rs1415359	1.00[JPT][hapmap]
rs1415364	1.00[JPT][hapmap]
rs1463034	0.82[CHB][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs1463035	0.82[CHB][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs1463037	0.82[CHB][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs1463038	0.82[CHB][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs1463039	0.82[CHB][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs1538041	0.82[CHB][hapmap];1.00[JPT][hapmap];0.90[ASN][1000 genomes]
rs1564143	1.00[JPT][hapmap]
rs1591636	0.82[CHB][hapmap];1.00[JPT][hapmap];0.90[ASN][1000 genomes]
rs1591637	1.00[JPT][hapmap]
rs1621055	0.82[CHB][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs1622838	1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs1676491	0.80[ASN][1000 genomes]
rs1676493	0.82[CHB][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs1676494	0.82[CHB][hapmap];0.87[ASN][1000 genomes]
rs1676495	0.87[ASN][1000 genomes]
rs1676497	0.82[CHB][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs1676498	1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs1676499	0.82[CHB][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs1676500	0.82[CHB][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs1676501	1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs1676502	1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs17447925	0.95[ASN][1000 genomes]
rs17506286	1.00[CHB][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs17507967	0.82[CHB][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs1763344	1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs1763345	0.82[CHB][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs1763346	0.82[CHB][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs1870958	0.82[CEU][hapmap];0.82[CHB][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs1903787	1.00[JPT][hapmap]
rs1932333	0.87[ASN][1000 genomes]
rs2050601	0.82[CHB][hapmap];1.00[JPT][hapmap];0.95[ASN][1000 genomes]
rs2061704	1.00[JPT][hapmap]
rs2065922	1.00[JPT][hapmap]
rs2252146	0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs2254082	1.00[JPT][hapmap]
rs2376280	1.00[JPT][hapmap]
rs2376281	1.00[JPT][hapmap]
rs2376284	0.90[ASN][1000 genomes]
rs2615977	1.00[JPT][hapmap]
rs2615987	1.00[JPT][hapmap]
rs2615999	0.82[CHB][hapmap];1.00[JPT][hapmap];0.80[ASN][1000 genomes]
rs2622840	1.00[ASN][1000 genomes]
rs2622841	0.83[YRI][hapmap]
rs2622848	1.00[JPT][hapmap]
rs2622868	0.83[YRI][hapmap]
rs2622870	1.00[CEU][hapmap];0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2622874	1.00[CEU][hapmap];0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[YRI][hapmap];1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2622876	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs2622877	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs2622880	0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs2783570	0.82[CHB][hapmap];1.00[JPT][hapmap];0.87[ASN][1000 genomes]
rs2786120	0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs2786121	1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs2786122	0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs2786124	0.81[YRI][hapmap]
rs2929163	0.82[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs3102053	1.00[JPT][hapmap]
rs34038518	0.82[ASN][1000 genomes]
rs34090601	0.95[ASN][1000 genomes]
rs34110240	0.95[ASN][1000 genomes]
rs34137810	0.90[ASN][1000 genomes]
rs34138324	0.95[ASN][1000 genomes]
rs34157185	0.85[ASN][1000 genomes]
rs34206172	0.90[ASN][1000 genomes]
rs34229612	0.95[ASN][1000 genomes]
rs34243101	0.95[ASN][1000 genomes]
rs34277983	0.95[ASN][1000 genomes]
rs34305103	0.95[ASN][1000 genomes]
rs34347324	0.85[ASN][1000 genomes]
rs34408616	0.95[ASN][1000 genomes]
rs34413966	0.95[ASN][1000 genomes]
rs34456893	0.92[ASN][1000 genomes]
rs34542642	0.95[ASN][1000 genomes]
rs34587338	0.95[ASN][1000 genomes]
rs34637912	0.90[ASN][1000 genomes]
rs34727523	0.90[ASN][1000 genomes]
rs34762213	0.95[ASN][1000 genomes]
rs34765476	0.95[ASN][1000 genomes]
rs34822172	0.85[ASN][1000 genomes]
rs34882475	0.95[ASN][1000 genomes]
rs34883734	0.90[ASN][1000 genomes]
rs34965749	0.90[ASN][1000 genomes]
rs35037054	0.95[ASN][1000 genomes]
rs35071880	0.95[ASN][1000 genomes]
rs35138059	0.95[ASN][1000 genomes]
rs35150936	1.00[ASN][1000 genomes]
rs35192078	0.95[ASN][1000 genomes]
rs35196641	0.92[ASN][1000 genomes]
rs35269818	0.95[ASN][1000 genomes]
rs35278135	0.95[ASN][1000 genomes]
rs35351574	0.85[ASN][1000 genomes]
rs35384282	0.92[ASN][1000 genomes]
rs35486863	0.87[ASN][1000 genomes]
rs35498106	0.95[ASN][1000 genomes]
rs35512814	0.82[ASN][1000 genomes]
rs35514519	0.95[ASN][1000 genomes]
rs35573953	0.90[ASN][1000 genomes]
rs35595325	0.85[ASN][1000 genomes]
rs35613209	0.95[ASN][1000 genomes]
rs35648695	0.95[ASN][1000 genomes]
rs35659176	0.95[ASN][1000 genomes]
rs35671668	0.95[ASN][1000 genomes]
rs35707694	0.95[ASN][1000 genomes]
rs35727167	0.90[ASN][1000 genomes]
rs35834443	0.92[ASN][1000 genomes]
rs35839974	0.90[ASN][1000 genomes]
rs35872185	0.95[ASN][1000 genomes]
rs35884314	0.95[ASN][1000 genomes]
rs35908252	0.85[ASN][1000 genomes]
rs35979991	0.95[ASN][1000 genomes]
rs36000197	0.95[ASN][1000 genomes]
rs36005955	0.95[ASN][1000 genomes]
rs36011373	0.95[ASN][1000 genomes]
rs3767272	0.82[CHB][hapmap];0.92[ASN][1000 genomes]
rs3850459	0.82[CHB][hapmap];1.00[JPT][hapmap];0.90[ASN][1000 genomes]
rs3934352	0.90[ASN][1000 genomes]
rs4338381	1.00[JPT][hapmap]
rs4353117	1.00[CHB][hapmap];0.95[ASN][1000 genomes]
rs4478834	0.82[CHB][hapmap];1.00[JPT][hapmap];0.90[ASN][1000 genomes]
rs4907986	1.00[JPT][hapmap]
rs4908280	1.00[JPT][hapmap]
rs4908283	0.92[ASN][1000 genomes]
rs4908286	1.00[JPT][hapmap]
rs4908291	1.00[JPT][hapmap]
rs61816501	0.95[ASN][1000 genomes]
rs61816502	0.95[ASN][1000 genomes]
rs61816503	0.95[ASN][1000 genomes]
rs621734	1.00[JPT][hapmap]
rs66473612	0.95[ASN][1000 genomes]
rs66531224	0.87[ASN][1000 genomes]
rs66626223	0.87[ASN][1000 genomes]
rs6663034	1.00[JPT][hapmap]
rs6670486	1.00[JPT][hapmap]
rs6672647	1.00[JPT][hapmap]
rs6689957	0.95[ASN][1000 genomes]
rs6695665	0.82[CHB][hapmap];1.00[JPT][hapmap];0.90[ASN][1000 genomes]
rs67016898	0.87[ASN][1000 genomes]
rs67621984	0.87[ASN][1000 genomes]
rs71512566	0.95[ASN][1000 genomes]
rs71512568	0.95[ASN][1000 genomes]
rs71592265	0.82[ASN][1000 genomes]
rs71655803	0.90[ASN][1000 genomes]
rs71655804	0.90[ASN][1000 genomes]
rs71655805	0.90[ASN][1000 genomes]
rs71655806	0.90[ASN][1000 genomes]
rs71655807	0.85[ASN][1000 genomes]
rs71655808	0.85[ASN][1000 genomes]
rs71664950	0.95[ASN][1000 genomes]
rs71664951	0.95[ASN][1000 genomes]
rs71664952	1.00[ASN][1000 genomes]
rs71664953	0.93[ASN][1000 genomes]
rs71664954	1.00[ASN][1000 genomes]
rs71664955	1.00[ASN][1000 genomes]
rs71664959	0.95[ASN][1000 genomes]
rs71664961	0.95[ASN][1000 genomes]
rs71664962	0.95[ASN][1000 genomes]
rs71664963	0.95[ASN][1000 genomes]
rs71664964	0.95[ASN][1000 genomes]
rs71664965	0.95[ASN][1000 genomes]
rs71664966	0.95[ASN][1000 genomes]
rs71664967	0.95[ASN][1000 genomes]
rs71664968	0.95[ASN][1000 genomes]
rs71664969	0.95[ASN][1000 genomes]
rs71664974	0.87[ASN][1000 genomes]
rs71664976	0.90[ASN][1000 genomes]
rs71664978	0.90[ASN][1000 genomes]
rs71664979	0.90[ASN][1000 genomes]
rs71664980	0.90[ASN][1000 genomes]
rs71666999	0.90[ASN][1000 genomes]
rs7517682	1.00[JPT][hapmap]
rs7522293	0.82[ASN][1000 genomes]
rs7532572	1.00[JPT][hapmap]
rs7544130	1.00[JPT][hapmap]
rs7550118	1.00[JPT][hapmap]
rs945748	1.00[JPT][hapmap]
rs951414	0.95[ASN][1000 genomes]
rs9970114	1.00[JPT][hapmap]

Variant overlapped rSNPs/rCNVs (count:30 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv522922	chr1:103305021-103764640	Enhancers Strong transcription Flanking Active TSS Weak transcription Genic enhancers Bivalent/Poised TSS ZNF genes & repeats Flanking Bivalent TSS/Enh Active TSS Bivalent Enhancer Transcr. at gene 5' and 3'	TF binding region CpG island Chromatin interactive region lncRNA	7 gene(s)	inside rSNPs	diseases
2	nsv870600	chr1:103336601-103548497	Weak transcription Enhancers Active TSS Strong transcription Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
3	nsv871732	chr1:103339272-103466917	Genic enhancers Weak transcription Enhancers ZNF genes & repeats Flanking Active TSS Strong transcription Bivalent/Poised TSS Active TSS Transcr. at gene 5' and 3' Bivalent Enhancer	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
4	nsv871475	chr1:103339272-103548497	Weak transcription Enhancers Strong transcription Flanking Active TSS Genic enhancers Active TSS ZNF genes & repeats Transcr. at gene 5' and 3' Bivalent Enhancer Bivalent/Poised TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
5	nsv870487	chr1:103349419-103466917	Weak transcription Active TSS Enhancers Strong transcription Flanking Active TSS ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
6	nsv871019	chr1:103350903-103466917	Weak transcription Enhancers Strong transcription ZNF genes & repeats Active TSS Genic enhancers Flanking Active TSS	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
7	nsv870644	chr1:103352451-103466917	Weak transcription Strong transcription Enhancers ZNF genes & repeats Active TSS Genic enhancers Flanking Active TSS	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
8	nsv871741	chr1:103352451-103517428	Strong transcription Weak transcription Enhancers ZNF genes & repeats Genic enhancers Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
9	nsv871078	chr1:103352451-103548497	Enhancers Weak transcription Strong transcription Genic enhancers ZNF genes & repeats Active TSS Flanking Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
10	nsv871494	chr1:103354138-103466917	Weak transcription Genic enhancers Strong transcription Enhancers Active TSS Flanking Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
11	nsv870607	chr1:103362909-103528128	Weak transcription Strong transcription Enhancers Flanking Active TSS Genic enhancers ZNF genes & repeats Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
12	nsv870995	chr1:103384610-103548497	Weak transcription Enhancers Strong transcription ZNF genes & repeats Genic enhancers Flanking Active TSS Active TSS	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
13	nsv871929	chr1:103393457-103466917	ZNF genes & repeats Strong transcription Weak transcription Enhancers Flanking Active TSS Genic enhancers Active TSS	TF binding region CpG island Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
14	nsv871372	chr1:103403752-103564540	Strong transcription Enhancers Active TSS Genic enhancers Weak transcription ZNF genes & repeats Flanking Active TSS Transcr. at gene 5' and 3'	TF binding region Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
15	nsv871067	chr1:103407999-103509323	Enhancers Weak transcription Strong transcription Genic enhancers Active TSS	TF binding region Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
16	nsv871736	chr1:103409100-103548497	Strong transcription Weak transcription Genic enhancers Enhancers Active TSS ZNF genes & repeats Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
17	nsv870521	chr1:103409558-103466917	Strong transcription Weak transcription Enhancers Genic enhancers	TF binding region Chromatin interactive region	1 gene(s)	inside rSNPs	diseases
18	nsv871567	chr1:103416690-103499049	Weak transcription Strong transcription Enhancers Active TSS Genic enhancers	TF binding region Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
19	nsv871657	chr1:103427381-103528128	Weak transcription Strong transcription ZNF genes & repeats Enhancers Genic enhancers Active TSS	TF binding region Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
20	nsv871198	chr1:103432687-103498029	Weak transcription Strong transcription Enhancers Genic enhancers Active TSS	TF binding region Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
21	nsv546935	chr1:103438795-103498029	Weak transcription Strong transcription Enhancers Genic enhancers Active TSS	TF binding region Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
22	nsv462772	chr1:103438795-103499896	Strong transcription Enhancers Weak transcription Genic enhancers Active TSS	TF binding region Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
23	nsv546936	chr1:103438795-103499896	Weak transcription Enhancers Strong transcription Genic enhancers Active TSS	TF binding region Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
24	nsv462783	chr1:103438795-103548497	Strong transcription Enhancers Weak transcription ZNF genes & repeats Genic enhancers Active TSS Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
25	nsv546937	chr1:103438795-103548497	Strong transcription Weak transcription Enhancers Active TSS Genic enhancers ZNF genes & repeats Flanking Active TSS	TF binding region Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
26	nsv462794	chr1:103450196-103539007	Weak transcription Strong transcription Enhancers ZNF genes & repeats Genic enhancers Active TSS	TF binding region Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
27	nsv546938	chr1:103450196-103539007	Strong transcription Weak transcription Enhancers Active TSS Genic enhancers ZNF genes & repeats	TF binding region Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
28	nsv871286	chr1:103455217-103528128	Weak transcription Strong transcription Genic enhancers ZNF genes & repeats Enhancers Active TSS	TF binding region Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases
29	nsv830893	chr1:103458498-103635579	Enhancers Flanking Active TSS Weak transcription Strong transcription Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Genic enhancers Bivalent/Poised TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	6 gene(s)	inside rSNPs	diseases
30	nsv871733	chr1:103459537-103509323	Strong transcription Weak transcription Enhancers Genic enhancers Active TSS	TF binding region Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr1:103369600-103498600	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
2	chr1:103386200-103482000	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
3	chr1:103415800-103485200	Strong transcription	Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells	embryonic stem cell
4	chr1:103423000-103468200	Weak transcription	HSMMtube	muscle
5	chr1:103423800-103476000	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
6	chr1:103425000-103478000	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
7	chr1:103446800-103497800	Weak transcription	HSMM	muscle
8	chr1:103449200-103545200	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
9	chr1:103450800-103470200	Strong transcription	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
10	chr1:103453200-103467400	Weak transcription	HUES64 Cell Line	embryonic stem cell
11	chr1:103453400-103490000	Weak transcription	NH-A	brain
12	chr1:103454000-103468400	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
13	chr1:103457200-103462800	Weak transcription	Bone Marrow Derived Cultured Mesenchymal Stem Cells	Bone marrow
14	chr1:103460200-103516400	Weak transcription	H1 Derived Mesenchymal Stem Cells	ES cell derived
15	chr1:103460800-103465600	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
16	chr1:103460800-103466600	Weak transcription	Cortex derived primary cultured neurospheres	brain
17	chr1:103461800-103466800	Weak transcription	Foreskin Melanocyte Primary Cells skin03	Skin

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